Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0704 |
Symbol | |
ID | 8878782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | - |
Start bp | 678511 |
End bp | 679671 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | xylose isomerase |
Protein accession | YP_003506491 |
Protein GI | 291295093 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTACCAGC CCAGACCCGA GCATAAGTTC ACCTTTGGCC TTTGGACGGT AGGCAACATC GGGCGCGACC CCTTTGGCGA GGCCGTGCGG GAACGGCTCG AGCCCGACTA CGTGGTGTAC AGGCTGGCCG AGCTGGGGGC CTACGGGGTC AACCTGCACG ACGAAGACCT GATCCCCCGT GGCACGCCCC CGGCCGAGCG CGAGGCCATC CTGCGCCGCT TCAAGAAGGC CCTGCAGGAC ACCGGCCTCA AGGTGCCCAT GGTCACCGCC AACCTCTTCT CCGACCCGGC CTTTAAGGAC GGGGCCCTGA CCAGCCCCGA CCCCTGGGTG CGGGCCTACG CCCTGAAGAA GAGCCTCGAG ACCCTCGACC TGGGCGCCGA GCTGGGGGCC CAGATTTACG TGGTCTGGCC GGGGCGGGAG GGGGCCGAGG TAGACGCCAC CGGCAAGGCC CCGCGGGTAT GGGCCTGGTT CCGCGAGGCC CTGGACTTCA TGGCCGAGTA TGCGGAGGAG CAGGGCTACA ACTACCGCTT TGCCCTGGAG CCCAAACCCA ACGAGCCTCG AGGCGACATC TACCTGCCCA CCGTGGGCAG CATGCTGGCC CTGATCGGCA CCCTGAAGCA CCCGCACCGC TTTGGCCTCA ACCCCGAGTT CGCCCACGAG ACCATGGCCG GGCTCAACTT CGTGCACGCG GTGGCCCAGG CCCTGGAGAT GGGCAAGCTC TTCCACATCG ACCTGAACGA CCAGCGCATG AGCCGCTTCG ACCAGGATCT GCGCTTTGGC TCGGAGAACC TCAAGGCCGC GTTCTTCCTA GTGGATCTGC TCGAGGCCAG CGGTTACGAC GGCCCCCGCC ACTTCGACGC CCACGCCCTG CGCACCGAGG ACGAGGCCGG GGTCTGGGCT TTTGCCCGGG GCTGTATGCG CACCTACCTG ATTCTGAAGG AGAAAGCCCA GGCCTTCCGG GCCGACCCCG AGGTGAAGGC TTTGCTCGAG GCCTACTACC AGGCCGACCC CGAGCCTTTG GCCCTGCTGG GGGCCTACAG CCGGGAAAAA GCTCAGCGGC TCAAGCAGCT CGAGCTGCCC GAGGCCTGCC GCAGCCGCGG TTATGCCCTG GAGCAGCTCG ACCAGCTCGC CGTAGAGCAC CTGCTGGGGG TACGGGGATG A
|
Protein sequence | MYQPRPEHKF TFGLWTVGNI GRDPFGEAVR ERLEPDYVVY RLAELGAYGV NLHDEDLIPR GTPPAEREAI LRRFKKALQD TGLKVPMVTA NLFSDPAFKD GALTSPDPWV RAYALKKSLE TLDLGAELGA QIYVVWPGRE GAEVDATGKA PRVWAWFREA LDFMAEYAEE QGYNYRFALE PKPNEPRGDI YLPTVGSMLA LIGTLKHPHR FGLNPEFAHE TMAGLNFVHA VAQALEMGKL FHIDLNDQRM SRFDQDLRFG SENLKAAFFL VDLLEASGYD GPRHFDAHAL RTEDEAGVWA FARGCMRTYL ILKEKAQAFR ADPEVKALLE AYYQADPEPL ALLGAYSREK AQRLKQLELP EACRSRGYAL EQLDQLAVEH LLGVRG
|
| |