Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrub_0617 |
Symbol | |
ID | 8878695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus ruber DSM 1279 |
Kingdom | Bacteria |
Replicon accession | NC_013946 |
Strand | + |
Start bp | 596140 |
End bp | 596772 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | ribonuclease H-related protein |
Protein accession | YP_003506404 |
Protein GI | 291295006 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0129838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCGAG CGGCGAAGAA TCAAAGCAAG CATTACGTGG TCTGGAAGGG CCGAAAGACC GGTATATTCT CCTCCTGGCC CGAAGCCGAG GCGCAGGTCA AGGGTTTTGC GGGAGCCGAG TACAAGGCCT TCGATACCCT GAGCGAAGCC AGAGAGGCCT TTTCTGGGAG ATACCAGGAC TACCTGGGCC CAAAAGCCAC GCAGAACCGC CTCCTGGAAG TTCCCCCACC GATTACCCCC AGCTACTGCG TGGACGCAGC TTGCAGCGGC AATCCGGGGC TGCTGGAGTA CCGCTGTGTA GAGACCGCTT CGGGCAAGGA GATTTTTCAC CGGGGACCCT TTGCTCAGGG CACCAACAAC GTGGGCGAGT TTTTGGCGAT TGTCGAGGCC CTGAGGCTTT GCAAAGAAAA GGGCTACACC TGGCCCATCT ACTCCGACTC GATTAACGCG ATTGCCTGGG TCAAGGCCAA AAAAGCCCGC ACCAACCTGG TGCGCACCCA GCAAAACGCC GAGCTGTTCG AGCGCATATC CCAGGCCGAG GCCTGGCTAC GCTCCCATAC CTACCCTAAC CCGATCCTCA AGTGGCAGAC CGATAGCTGG GGGGAGAACC CGGCGGATTT CGGGCGGAAA TAA
|
Protein sequence | MARAAKNQSK HYVVWKGRKT GIFSSWPEAE AQVKGFAGAE YKAFDTLSEA REAFSGRYQD YLGPKATQNR LLEVPPPITP SYCVDAACSG NPGLLEYRCV ETASGKEIFH RGPFAQGTNN VGEFLAIVEA LRLCKEKGYT WPIYSDSINA IAWVKAKKAR TNLVRTQQNA ELFERISQAE AWLRSHTYPN PILKWQTDSW GENPADFGRK
|
| |