| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0612 |
|---|
| Symbol | |
|---|
| ID | 8878689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 590040 |
|---|
| End bp | 590534 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003506399 |
|---|
| Protein GI | 291295001 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000326067 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0417207 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGGGG GCTCGAGGCC CCAAGCGCTG CCGCAATCCC GCCGCCGGGT GACCTCGGCG
GGGGGGGTGG TGTTGCGCGA GCGGCCTGGG GGGAAGGGCC TGGAGGTGCT CCTCATCGCC
ATCAAAGACG GACGGGTCTG GAGCCTGCCC AAGGGCCAGG TAGAGCCAGG CGAGCGTTAT
CCACAAACCG CCGTCCGCGA GGTGCGTGAA GAGACTGGCA TCGAGGCCAG GGTACTGGCC
CCCCTGGGCA GCATCCGCTA TCACTTCACG GTCAAAGACG ACGGGGTACA AACCACCGTC
ACTAAGGAAG TTCATCACTT CTTGATGGGC TACGTGGGTG GCACACCCCG GCCCCAAAAA
GAAGAGGTGG ACGGGGTGGC CTGGTTCCCT GTGCGCGAGG CCCTTAAGCG GCTTTCGCAT
CAAAACGAGC GAAACGCCGT TCTCAAAGCC CTCGCCTGCT GGGACACCCA AGCACCCATG
AGCGCTCAGC CATAA
|
|---|
| Protein sequence | MVGGSRPQAL PQSRRRVTSA GGVVLRERPG GKGLEVLLIA IKDGRVWSLP KGQVEPGERY
PQTAVREVRE ETGIEARVLA PLGSIRYHFT VKDDGVQTTV TKEVHHFLMG YVGGTPRPQK
EEVDGVAWFP VREALKRLSH QNERNAVLKA LACWDTQAPM SAQP
|
|---|
| |