| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0579 |
|---|
| Symbol | |
|---|
| ID | 8878656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 547190 |
|---|
| End bp | 549865 |
|---|
| Gene Length | 2676 bp |
|---|
| Protein Length | 891 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | Type III site-specific deoxyribonuclease |
|---|
| Protein accession | YP_003506371 |
|---|
| Protein GI | 291294973 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.193547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCA AGTTCGAGAG CAACCAGGAG TACCAGCTCG AGGCCATCCA GGCAGTGACG
GGGGTATTCG AAGGGCAACC CTTGAGCGAG GGGCTCTACA CCCTGGGCAT GGAGTCCGAC
GAACTATATG GCATCGCCGC CTACGCCAAC GGGCTGCTGC TCAGCCCAGA GGCCCTGCTG
GAGAACGTCC GCCGGGTGCA GGAGGCCAAC GGGCTGGAAC CGAGCGATCG GCTCGAGGCC
ATCGAAATCC CCGATAGCGG CATCGCGCTC AACTTCTCGG TAGAGATGGA GACCGGGACT
GGCAAGACCT ACGTCTACCT CCGCACCATC TACGAGCTGC ACCGCCTCTA CGGCTTCAAG
AAGTTCATCG TCGCCGTGCC CAGCGTCGCC ATCCGGGAGG GGGTGCTCTC GAATCTGCGC
CTCACCAAAG AGCATTTCGA CACCCTCTAC GGCAACGTGC CGGTGGACTA CTGGGTCTAC
GACTCCAAAC AGGTCTCACG GCTGCGCTCC TTCGCTACCG AGAACACCCT GCAAATCCTT
ATCATCAACA TTGATGCCTT CAACAAACCG AGCAACAACG TGATCTTTCT CCCCAATGAC
CGGCTTTCGG GCTTCTGCCC CATCGAATTC ATCCGGGCGG CGCACCCGAT CGTCATCGTG
GACGAGCCGC AGAACTTCGA GAGCAACCTG GCGAAACGAG CCCTGGCGAG CCTGAATCCC
CTCTGCACGC TGCGTTACTC AGCCACCCAC CGCAACCCCT ACAACCTGCT TTACCGGCTC
GACCCGGTAC GGGCCTACGA CCTCGGGCTG GTCAAGCAGA TCGAGGTGAC GTCGGTGCTC
GAGGAGGAGA ACTTCAACGT TCCCTACCTG AAGCTGAAGG AAGTCAAGGC CACCAAAAGC
AGCATCAGCG CTAAGGTAGA GCTCGACGTT TGGGACGGGA GTGCCGCCAA GCGCAAATCC
GTGACCCTCA AGCAGGGCTC CGACCTCTAC GAGCTGTCGG GGGGGCGGGA GCTGTACCGG
GGCTACGTGG TGGACGAGAT CGACGCGGGC TTCAAGTACG TGAGCTTCGC CAACGGGGTG
CGCCTGGAGG AGGGGCAGGA ACAAGGAGTC AACGCCGATG AGCTGATGCG GGCGCAGATC
CGAGAAACCG TGCGCGAACA CCTGAACAAG GAACTCGCCG TCGCGCGGCT GCCGGAGGGC
CAGCGCCTCA AGGTGTTGTC CCTGTTTTTC ATCGACCGGG TAGCCAACTA CCGGGGCGAA
GACGCCAAGT TTCGGCGCTG GTTCGAGGAG GCCTACCACG AACTTTCGTC ACTCCCGGTC
TACGCCTCCT TGAACCTTCC CCCGGTGGAG CAGGTGCACG GGGGCTACTT CGCCGAGGAC
AAGACAGGAT GGAAGGACAC CTCGGGCAAT ACCCAGGCCG ACGAGGAGGC CTACGAGAAG
ATCATGCGCG ATAAGGAGCG GCTGTTGTCG CTGGAGGAGC CCTTGCGCTT CATCTTCAGC
CACTCGGCCT TGCGCGAGGG CTGGGACAAC CCCAACGTGT TCCAGATCTG CACGCTCAAC
GAGACCCGCT CCGAGGTCAA GAAACGCCAG GAGATCGGGC GGGGCCTGCG CCTGCCGGTG
CGCGAGAACG GGGAACGATC GTTCGACGCC CGGATCAATC GGCTGACCGT CATCGCCAAC
GAGAGCTACA AGGACTTCGC TAAGGCCCTG CAGACCGAAA TCGAGGAGGA GACCGGCCTT
GACTTTGGGC AGGAGCGTAT CAAAAACAGC CGCGAGCGGC GCACCCTCAA GCTCAAGAAG
GGCTGGGAGC TCAACGAGGA CTTCCGCGCG CTTTGGGAAC GGATCAAGCA CCACACCCGC
TACCGGGTGG AGTTCGACAC CGAGGACCTC GTGCAGCGGG CCGCCAAGGC CATCCGTGAG
ATGCCAAAGG TCGAGCGCCC GCGCTACCGC ATCGAAAAGG GGCGCATCGT CCGGCTTGGC
GAAGACCTCG AGACCGCACT CGTCAGGGTC AACACCGAAG ACCTGGACTT CCGCCCCGCC
GTCCCTGACC TGCTGGCCTA CCTTCAGCGC GAGACCGAGC TGACTCGCGG CACCCTGGCC
CGCATCCTCA AGGAGTCGGG GCGGCTGGCG GATGCCAAGG AGAACCCCCA ACAGTTCATC
GACCTAGCCC TAGCCGCCAT CAGGAACACC CTCGGGGAGC TGATGGTGGA GGGCATCAAG
TACGAACGGC TCGAGGGACA GGCCTACGAC ATGATGCTCT TCGAGAGCAA GGAACTCATT
GGCTACCTGG ACAAAATCGT CGAGGTGAGC AATTCCATCT ACGACGGGGT GATCTTCCAG
TCGGAGGTCG AGCGGGGCTT CGCCGAAGCC CTGGACAAGC GCGAGGATGT GAAGCTCTTC
GTTAAGCTCC CTGACTGGTT CGAGGTGGAC ACCCCGCTCG GCAAGTACCG CCCCGACTGG
GCCGTGGTCA TGGTAGATGG CGAGCAGGAG AAGCTCTACT TCATCTGCGA GACCAAGGGC
AGCAAGGACA TGACTAAGCT GCGCGTCAGC GAGCGCCTCA AGATCGAGAG CGGCAGGGCC
CATTTCCAGG CGCTCGAGGT TCCTTACGTC GTAGAAACCT CCGCGGCTGA ACTGAGCCCT
GAGCGCGTCC GATCAAGCTT CAAAAGTAGC GAATGA
|
|---|
| Protein sequence | MKIKFESNQE YQLEAIQAVT GVFEGQPLSE GLYTLGMESD ELYGIAAYAN GLLLSPEALL
ENVRRVQEAN GLEPSDRLEA IEIPDSGIAL NFSVEMETGT GKTYVYLRTI YELHRLYGFK
KFIVAVPSVA IREGVLSNLR LTKEHFDTLY GNVPVDYWVY DSKQVSRLRS FATENTLQIL
IINIDAFNKP SNNVIFLPND RLSGFCPIEF IRAAHPIVIV DEPQNFESNL AKRALASLNP
LCTLRYSATH RNPYNLLYRL DPVRAYDLGL VKQIEVTSVL EEENFNVPYL KLKEVKATKS
SISAKVELDV WDGSAAKRKS VTLKQGSDLY ELSGGRELYR GYVVDEIDAG FKYVSFANGV
RLEEGQEQGV NADELMRAQI RETVREHLNK ELAVARLPEG QRLKVLSLFF IDRVANYRGE
DAKFRRWFEE AYHELSSLPV YASLNLPPVE QVHGGYFAED KTGWKDTSGN TQADEEAYEK
IMRDKERLLS LEEPLRFIFS HSALREGWDN PNVFQICTLN ETRSEVKKRQ EIGRGLRLPV
RENGERSFDA RINRLTVIAN ESYKDFAKAL QTEIEEETGL DFGQERIKNS RERRTLKLKK
GWELNEDFRA LWERIKHHTR YRVEFDTEDL VQRAAKAIRE MPKVERPRYR IEKGRIVRLG
EDLETALVRV NTEDLDFRPA VPDLLAYLQR ETELTRGTLA RILKESGRLA DAKENPQQFI
DLALAAIRNT LGELMVEGIK YERLEGQAYD MMLFESKELI GYLDKIVEVS NSIYDGVIFQ
SEVERGFAEA LDKREDVKLF VKLPDWFEVD TPLGKYRPDW AVVMVDGEQE KLYFICETKG
SKDMTKLRVS ERLKIESGRA HFQALEVPYV VETSAAELSP ERVRSSFKSS E
|
|---|
| |