| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0540 |
|---|
| Symbol | |
|---|
| ID | 8878617 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 519133 |
|---|
| End bp | 520635 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003506335 |
|---|
| Protein GI | 291294937 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0525494 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.138984 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGG TTCGTTTTTT GTTAGCGTTA ACTGCATTGC TATCAGCTTG TTCTGTCAGT
CCCAGCAAGG TGAATCTTGG TCAGGAACGA CCCGACCCTG ATGCTGTCAC TGTTCAGTTC
GATCCCATAG GAGGTACGGC TGGGGGTGTA AGCGCACAGG GGATCGACAT CAGCCTATGC
GTCTTCACCC TGAATTATCC GCACCAGTCG GGGTACAATC CTACCGAAGT CAAAGCCGAT
GCCATCGGTC GATGCCCGCC CAGCAGTGAG CCCTTCCTCC TCACAGCGTT CCTGGAGCTA
GAACGCAACC AGGGCGGGGT CTGGACCAAG GTTGCCACCG GCCCCCGGGT CCGTAAGGAG
GTGGGAGCGG CAGGTGCGAC CTGGAGGCAG TACGAGCTGG TCGTTGTGGC CACTTGCCGT
GACGGAGTCT ACCGAAGCAA GCTCAACATC GAGGCGGTCA ACCCTGATGG CGGGGTGATC
GCGATTCCGC TAGCACGGCG GTACTCCAAC GAGCGCAATG TTCAGTGCAG ACCCCGCGCA
GTATCGTTGG TGGTCGATGA TACCGGCTCA ATGGGCAGCG TCATCGGAGC GGTCAAGGCT
TCCCTCGCCG GGTATATAAA TAGCATCCCT GAGGACGAGT ACACCCTGTG GAACCTGATC
ACCTTCAAAG ACGACGTCAG GGTCCTGGGC ACCACCACCG ACCGCAACGC CATCCTTGGT
TGGGTAAATG GCCTCTACGC CTGGGGTGGC GATGACTGTC CCGAGAACGT GCTAGGCGGA
ATCAGCTCGG GGATCTTGGC CCTTTGGCCT TATGTGGACC ACACTCGAGA TCTGGTGGTA
ATCACCGACG CCTCAGCCCA GCCCGGCGAC GTGAGCGGGA TCCTCGCGGT GGCCAAGCTC
AACAATGTCC GGGTGAACGT GCTGCTCTCA GGGGATTGTG GTCTCCCGCC CGCTTCGGTA
TCCAGCCGGG CAGGCATTGG CGTTCAGAGC GTGAGCACAA CGGCGCTTTC TAGCCAGGTC
GTGCTCAAGC GCATCGCCGA GGAAACCGGG GGCAAGTACT TCTACCTCCC CGGCGGAAGC
CAGTCCGATT TCGAGTATGC CCTGGGTGAA ATCTTCAACA ACATCCGGGA CACCGACCCT
TCCACGGTAG ACCGTGAGCC CCCCAGTGTT ACCGTGAGCG TTACCCCATC TACCCTCTGG
CCACCCAACC ACAAGCTGGT CGAGGTCAAG CCTGCTGTAA GTGCCAGCGA CAACCTCGAC
CCTACCCCAA GGGTGGAGCT GGTCGGGGTG AAGGTAAGCG AGCCCGACGA CGGCCAGGGC
GACGGGAACA CCGCTGATGA CGTGCAGATC ACCACTAACG GCCGGATCTT CGTGCGGGCC
GAGCGCAGCG CCCAGGGCAA CCGCCGCGTC TACACAGTCA CGTACCGGGC CACCGACGCC
AGCGGGAACA CTGGCTACGG CTCGGCCGAC GTGGTGGTAC CCCATGACCG CTCCGGAAAG
TAG
|
|---|
| Protein sequence | MNKVRFLLAL TALLSACSVS PSKVNLGQER PDPDAVTVQF DPIGGTAGGV SAQGIDISLC
VFTLNYPHQS GYNPTEVKAD AIGRCPPSSE PFLLTAFLEL ERNQGGVWTK VATGPRVRKE
VGAAGATWRQ YELVVVATCR DGVYRSKLNI EAVNPDGGVI AIPLARRYSN ERNVQCRPRA
VSLVVDDTGS MGSVIGAVKA SLAGYINSIP EDEYTLWNLI TFKDDVRVLG TTTDRNAILG
WVNGLYAWGG DDCPENVLGG ISSGILALWP YVDHTRDLVV ITDASAQPGD VSGILAVAKL
NNVRVNVLLS GDCGLPPASV SSRAGIGVQS VSTTALSSQV VLKRIAEETG GKYFYLPGGS
QSDFEYALGE IFNNIRDTDP STVDREPPSV TVSVTPSTLW PPNHKLVEVK PAVSASDNLD
PTPRVELVGV KVSEPDDGQG DGNTADDVQI TTNGRIFVRA ERSAQGNRRV YTVTYRATDA
SGNTGYGSAD VVVPHDRSGK
|
|---|
| |