Gene Mrub_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0454 
Symbol 
ID8878529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp440189 
End bp441016 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content67% 
IMG OID 
Product4-diphosphocytidyl-2C-methyl-D-erythritolkinase 
Protein accessionYP_003506251 
Protein GI291294853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.139855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGC TAGCCCCGGC CAAGGTGAAC CTGGGTCTTT CGGTGCTGGG CCGCCGCCCC 
GACGGCTACC ACGAATTGCA CACCCTGTTT GCAGCCCTGC GGGTGGGCGA CCGCCTCTGG
GTGGAGGCCA TTCCCGAGGG AATTGAGCTG GAGGTGTGGG GCAGGGGCCT GCCCGCTGAT
ACCAACAACC TGGTATACAA GGCGGCGCAG GCTTACCTGA CGGCTGCTGG CTGGCCCGGT
GGGGTGCGGG TGGTACTGGA AAAGAACCTG CCCCTGGCCG CGGGGCTGGG TGGGGGTTCC
TCCGATGCGG CGGCGGTGCT GCGGGCTTTA TCCCAGCTCT ATCCATCCGC CCTCGAGCTG
CCGGGGCTGG CCCTTGGGCT GGGGGCCGAC GTGCCCTTTT TCCTGGGGCC GGGCCTGGCC
GAAGGGCGGG GGGTGGGTGA ACGACTGACC CCCCTGCCGC CCATCCGGGC TGCGCTGGTG
CTGGTGAACC CGGGCATTGC GGTTTCGGCG GCTGAGGCCT ACAAGGGCCT TACACCCGAG
ATGTGGCAGC CCGAACTGGA TGTGGCGGGG GTGGTGGAAG CCATACAGGT GGGGGAGGAG
CCCCCTTACT GGAATACGCT CGAGCGCTCC GTATTTCGCC TGCACCCCTA CCTCGAGGCC
CTCAAACAAG AGCTGTACCG CCTGGGGCTC AGGGGCGTGC TGATGTCGGG CTCGGGTTCT
ACCCTGTTTG GGCTGGCCCG TGATGGGGCC GAGGCCGGGT ATCTGGCTGG GGTGCTGCGG
GATAAGCACC CTGGGTTCTG GGTGGTCGCT ACCGAGACCG TAAGCTAA
 
Protein sequence
MELLAPAKVN LGLSVLGRRP DGYHELHTLF AALRVGDRLW VEAIPEGIEL EVWGRGLPAD 
TNNLVYKAAQ AYLTAAGWPG GVRVVLEKNL PLAAGLGGGS SDAAAVLRAL SQLYPSALEL
PGLALGLGAD VPFFLGPGLA EGRGVGERLT PLPPIRAALV LVNPGIAVSA AEAYKGLTPE
MWQPELDVAG VVEAIQVGEE PPYWNTLERS VFRLHPYLEA LKQELYRLGL RGVLMSGSGS
TLFGLARDGA EAGYLAGVLR DKHPGFWVVA TETVS