| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0420 |
|---|
| Symbol | |
|---|
| ID | 8878493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | - |
|---|
| Start bp | 397809 |
|---|
| End bp | 399344 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | glycoside hydrolase family 3 domain-containing protein |
|---|
| Protein accession | YP_003506217 |
|---|
| Protein GI | 291294819 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.500128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGC TATTTCTTGC CACCAGCCTG ATGATGGTAG ACATCCCCGG CCCCACCCTG
GACGCGGCCA CCCGCGCCCA CCTCGAGCGC TACCGCTTTG GGGGGGTGTG CCTGTTTCGC
AAAAACATCC AGAACCCCGA GCAGGTTCGC CAACTGGTGG CCGAGATTCG CGCGGTGCTG
GGGCCCCAGG CCTGGATTGC CATTGACCAG GAGGGCGGGG CGGTGCAGCG GGTACTGGAG
TTTGCCCTGG CCCCCTCCCC GATGGCCCTG GGCGCGGTGG GGGAGGTCAA GACGGCCGAA
GCGGTGGGGG CGGCGGTGGG CCGTGCCCTC ATCTCGCTGG GCATCAACTG GAACTTTGCC
CCCTCCGTGG ACGTGAACAC CAACCCCCAA AACCCGGTGA TCGGCGACCG CAGCTTTGGC
TCCGACCCCA AAAAAGTAGC CCGGCTGTCC CTGGCCTGGG CCCGGGGCCT CGAGCAGGCC
GGGGTAATGG CTGCCATCAA GCATTTCCCC GGACACGGCG ACACCTTCCT GGACTCGCAC
CTCGAGCTGC CAGTGGTGAA TAAAACGCTG GAAGAGCTCG AGCGCACCGA ACTCTACCCC
TTTCGCAAAG CTGTGGAAGC CCAGATCAGC TCGATTATGA GCGCCCATAT CCGCTTCCCC
GCCCTGGACA AACAGCACCC GGCCACCCTC TCTAAAAAAA TCCTCACCGG GTTCTTGCGT
AAAAAATTGG GCTTTCAGGG CATCATCGTC ACCGATGCGC TGGACATGAA AGCCATCAGC
AAAAACTACC CCATCGGCGA GGCTGCCGTA AAAAGCTTGC AGGCCGGGGC CGATATGATT
CTGTCGCTGG GCCAGCCCGA GGTGCATATC GCCCAGGCCA CCGCCATCCA GCAAGCCCTG
GAAAACGGCT CACTTTCCGA GGAACAGGCC CGGCAAAGCC AACTGCGTCT GCTGGAGGCC
GCCCTGCGCT TCCCCGGCCA GGCCCAGCCC TACCCCCCAG CCCAGCAGAA GCGCGACCAG
GCCCTCATGG AACAGGTGGC CCTGCGGAGC ATTACCGCCT ACCGCCGGCC GCTGCGCCCC
CGGCGCTCGG ATCGAATTTT GCTGGTCTCG GCGGGCAGCA CCTTCGAGGC CGGCCCCTAC
GGCGAGACCC TCGCGGTCAA GGACTTTGCC GATCTGCTCA AGACCCGCTT CGCCGGGGTC
AGTCAGTTTG TCTACGACCC CCAACAGGCC GATGCCTTCA AGAGCGGGCT GGAACAGGCC
GCCGCCACGG CCGACTACCT GCTGGTGGTC TCGGTCGGTC GCGGCCGCCT GAGCGAAGCG
GAAACCCGGC TCCTCAAGCA GGCCTTCACC CTGGGCAAAC GGGCCGCGCA CATCGCTTTG
TGGAACCCCT ACCACATCCT GAGCCTGCGC AAACCGGCCT TCGTGACCTA TGGCTTCCGC
GCCCCCACCC TGCGGGCCCT GGTCAAGGTG CTGGGCGGTG CGCGGGCCCG GGGTTCCTTG
CCGTTCAAGC TGCGCCAAAA TCGGGTTAGT CTATAG
|
|---|
| Protein sequence | MEKLFLATSL MMVDIPGPTL DAATRAHLER YRFGGVCLFR KNIQNPEQVR QLVAEIRAVL
GPQAWIAIDQ EGGAVQRVLE FALAPSPMAL GAVGEVKTAE AVGAAVGRAL ISLGINWNFA
PSVDVNTNPQ NPVIGDRSFG SDPKKVARLS LAWARGLEQA GVMAAIKHFP GHGDTFLDSH
LELPVVNKTL EELERTELYP FRKAVEAQIS SIMSAHIRFP ALDKQHPATL SKKILTGFLR
KKLGFQGIIV TDALDMKAIS KNYPIGEAAV KSLQAGADMI LSLGQPEVHI AQATAIQQAL
ENGSLSEEQA RQSQLRLLEA ALRFPGQAQP YPPAQQKRDQ ALMEQVALRS ITAYRRPLRP
RRSDRILLVS AGSTFEAGPY GETLAVKDFA DLLKTRFAGV SQFVYDPQQA DAFKSGLEQA
AATADYLLVV SVGRGRLSEA ETRLLKQAFT LGKRAAHIAL WNPYHILSLR KPAFVTYGFR
APTLRALVKV LGGARARGSL PFKLRQNRVS L
|
|---|
| |