| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0307 |
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| Symbol | |
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| ID | 8878378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus ruber DSM 1279 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013946 |
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| Strand | - |
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| Start bp | 274085 |
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| End bp | 275662 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | alpha amylase catalytic subunit |
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| Protein accession | YP_003506105 |
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| Protein GI | 291294707 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGT GGAAAACCGC AAGCATCTAT CAGATTTACC CGCGCAGCTT TCAAGATTCC
AACGGCGATG GGATTGGCGA CCTGCCAGGC ATCCGTAAGC GCCTCCCCTA CATCCGCGAC
CTGGGCTTCG ACGCCATCTG GCTCTCGCCC TTTTACAGGT CGCCCATGAA GGACTTCGGC
TACGACGTGG CCGACTACTG CGACGTAGAC CCCATCTTCG GCACGCTCAA AGACTTCGAC
GAGCTCCTGG CCGAGGCCCA CCGGCTGGGC CTCAAGGTGC TCATCGACTT TGTGCCCAAC
CACACCTCCG ACCAGCACCC CTGGTTTTTG GAGTCCAGGA GCAGCCGCGA CAACCCCAAG
CGCGACTGGT ACGTCTGGCG CGACCCCGCC CCGGACGGAG GCCCCCCCAA CAACTGGCAG
GCCCACTTCG GCGGTCCCTC CTGGACGCTG GACGAAAAGA CCGGCCAGTA CTACCTGCAC
CAGTTCCTGC CCGAGCAGCC CGACCTCAAC TGGCGCAACC CCGAGGTACG CCAGGCCATG
TACGACGTAA TGCGCTTCTG GCTGGACAAG GGGGTGGATG GTTTCCGCGT TGATGTGATC
TGGCTGCTGG TGGAGGATGC GCTCTTCCGC GACGAGCCCG ACAACCCCCA GTACAAGCCC
GGCGACATTG ACCGCTTCCG CCATATCCAC ATCTACCAGG AAGACCAGCC CGAGACCCGC
GAGATTGTGC AGGAGATGCG CGCCGTGCTG GACGAGTACC CCGGCAACCG GGTGATGATT
GGGGAAATTT ACCTGCCCTA CCACCAGCTT ATACCCTACT ACGGCACCCC GGAGCGACCC
GGCTGCCACC TGCCCTTCAA CTTCCACCTG ATTTCCAGGG GCCTGAACAA CTGGACGGCT
GAGAACATCC GCAGCATTGT GGAGGAGTAC GAGGCCAGCC TGCCCCCGTT CGCCACCCCC
AACTGGGTGC TGGGCAACCA CGACCAGCAC CGCCTGGCCA CCCGCATCGG GCACGAGCAG
GCCCGGATCG CGGCCATGCT GCTTTTTACC CTGCGGGGCT CACCCACCTG GTACTACGGC
GACGAGATTG GCATGGTGAA CGGAGAGATC CCCCCTGAGA AAGTGCAGGA CCCCGCGGCC
CTGCGCCAGC GCGGGGCCGC GGGCGAACAC GGCCGCGACC CCGAGCGCAC CCCCATGCAG
TGGACCCCCC ACGCCTATGC CGGCTTCAGC ACCCGTGAGC CCTGGCTCCC CATCAACCCG
GACTACCCCG AGCGCAACGT GGAGGCCCAG GACGCCGACC CCTTCTCGAT GCTGACCCTG
GTGCGCACCC TGCTGGTGGT GCGCAAGGAA ACGCCGGCCC TCCTGCACGG GGCCTACCAG
AGCTACAAGG CCCCCCAGGG GGTGTTCGCC TACCTGCGTG GGGGGGAGGT GCTGGTGGCG
CTGAACTTTA CCCAGAAGCC CCAAGCGCTC TCGACACCCG GCGGGGAAAT TCTGCTTTCG
ACCCATCTGG ATCGCTACGG GAAGGTGGAA GGGGTGCTCG AGCTGCGGCC CCACGAAGGC
CTGATTGTAA AGCTATGA
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| Protein sequence | MEWWKTASIY QIYPRSFQDS NGDGIGDLPG IRKRLPYIRD LGFDAIWLSP FYRSPMKDFG
YDVADYCDVD PIFGTLKDFD ELLAEAHRLG LKVLIDFVPN HTSDQHPWFL ESRSSRDNPK
RDWYVWRDPA PDGGPPNNWQ AHFGGPSWTL DEKTGQYYLH QFLPEQPDLN WRNPEVRQAM
YDVMRFWLDK GVDGFRVDVI WLLVEDALFR DEPDNPQYKP GDIDRFRHIH IYQEDQPETR
EIVQEMRAVL DEYPGNRVMI GEIYLPYHQL IPYYGTPERP GCHLPFNFHL ISRGLNNWTA
ENIRSIVEEY EASLPPFATP NWVLGNHDQH RLATRIGHEQ ARIAAMLLFT LRGSPTWYYG
DEIGMVNGEI PPEKVQDPAA LRQRGAAGEH GRDPERTPMQ WTPHAYAGFS TREPWLPINP
DYPERNVEAQ DADPFSMLTL VRTLLVVRKE TPALLHGAYQ SYKAPQGVFA YLRGGEVLVA
LNFTQKPQAL STPGGEILLS THLDRYGKVE GVLELRPHEG LIVKL
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