| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_0270 |
|---|
| Symbol | |
|---|
| ID | 8878340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus ruber DSM 1279 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013946 |
|---|
| Strand | + |
|---|
| Start bp | 235167 |
|---|
| End bp | 237092 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_003506068 |
|---|
| Protein GI | 291294670 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.527105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCAT TTTTGCGCAT AGGGGTTTCA TCGCTTGTCT TGGCTGGGTT GTTTTCGTAC
ACGCACGGGC TTCTATCTTT CAGTACGTCC TCTGAATGCG ATCTGCCTTA TACCCCGATC
TATAAAATTC AGGGCAGCGG CATGTCGGCA GCCATCACCG GCGATGTGGC AACCAAAGGC
GTGGTGGTGG GGGATTACGA AGGCCCCACC CCGGCCCTGC GGGGCTTCTA CATCCACGAC
CCCAGCGGTG ACGGGGATGT GAACACCTCC GACGGCATCT TTGTGTTCAA CGCTAACAAC
GACAGCGTGC GCCTGGGCGA GGTGGTGCGG GTGGTGGGAA CCGCGGGTGA GTTCCAGGAT
CAGACCCAGA TCAGCGCGGC CTCCATTACC AGGTGCGGAA CCGGTACCGT AACGCCTACC
GACGTGACCC TGCCCTTCGC CTCTGCCACC GAGGCCGAGC GCTACGAGGG CATGCTGGTG
CGGCTGCCCC AGACCCTTTA TGTAACCGAG CACTTCCAGC TTGGGCGCTT TGGCCAGGTG
GTGCTTTCGT CGGGCGGGCG GCTGAAGCAG CCCACCCACG CGACCACCCC CGGCGCGGCG
GCCAACGCCC TGCAGGCCCG GAACAACCTC AACCGCATCA TTCTGGACGA TGCCCTGCAA
AACCAGAACC CCGACCCCAT CCTGTTTGGG CGAAACGGCC AGCCCCTGAG CGCCAGCAAC
ACCCTGCGCG GCGGCGACAC CGCGACCGGC ATCGTGGGGG TGATGACCTA CACCTGGGCT
GGCAACGCGG CCAGCGGAAA CGCTTACCGG GTGCGGCCCA TGGGGGCTCT GAACGGGTAT
GTCAATTTCG TGGCGGCCAA CCCACGCCCG GCCACCCCGC CTGCGGTGGG CGGCACGCTG
CGGGTGGTGG GGTTCAACCT GCTCAATTTC TTCAACACCT TTGATGGTCT GCCGGATACG
GTAGACAACT GCACCTACGG GCTGGGTGGG GCCCCCGCCG ACTGCCGCGG CGCTGATACC
CCGGCCGAAT TTGACCGCCA GTGGCCCAAG ACGGTGGCGG CCATCCTGGC TATGAACCCG
GATGTGCTGG GGCTGAACGA ACTCGAGAAC GACGGGTACG GCCCCGATAG CGCCATCGCC
TTTTTGGTGA ACAAACTCAA CGAAGCCACC GCGCCGGGTA CCTATGCCTT TATTGATGCG
GACGCGGCCA CGGGTCAGGT GAACGCCCTG GGCACCGACG CCATCAAGGT GGGGCTGATT
TACAAGCCGG CCCGCGTGAC CCCGGTGGGC CAGACCGCGG TGCTCAACAC CCCAGCGTTT
GTCAACGGCG GCGACAGCGC GCCGCGCAAC CGGGCCTCGC TGGCCCAGGC CTTCCGGCAG
AACGACAATG GGGCCATCTT TATCGTGAAC GTGAACCACC TCAAGAGCAA GGGCTCGCCC
TGCGACCTGC CCGACCAGGG CGACGGCCAG GGCAACTGTA ATGCGGTGCG CACCAGGGCC
GTTCAGCAAC TGGTGGCCTG GCTGGCCACC CACCCCACCG GCATTGCCGA CCCAGACATC
CTCTTGATTG GCGATTACAA CTCTTATGCC CAGGAGGATC CCATTGCCAC GCTCAAGAAG
GCCGGCTTTA TCAACCTGCT CGAGGCCCGC CTGGGCCCCG ATGCCTACTC CTATGTGTTC
GATGGGCAGT GGGGCTACCT GGACTACGCG CTGGCCTCGG CCTCGCTGAA CGCCCAGGTG
TCGGGGGTGG CCGAGTACCA CATCAACGCC GACGAACCCA ATGTCCTCGA CTACAACACC
AACTTCAAAA CCCCCAACCT GCAGGTCCTG CTCTACGCCC CCGATCAGTA CCGCACCTCC
GACCACGACC CGGTGGTGGT GGGGCTGAAT CTTAGGGGAG AACCACAGCC CCCGGCCAGA
CCGTAG
|
|---|
| Protein sequence | MEPFLRIGVS SLVLAGLFSY THGLLSFSTS SECDLPYTPI YKIQGSGMSA AITGDVATKG
VVVGDYEGPT PALRGFYIHD PSGDGDVNTS DGIFVFNANN DSVRLGEVVR VVGTAGEFQD
QTQISAASIT RCGTGTVTPT DVTLPFASAT EAERYEGMLV RLPQTLYVTE HFQLGRFGQV
VLSSGGRLKQ PTHATTPGAA ANALQARNNL NRIILDDALQ NQNPDPILFG RNGQPLSASN
TLRGGDTATG IVGVMTYTWA GNAASGNAYR VRPMGALNGY VNFVAANPRP ATPPAVGGTL
RVVGFNLLNF FNTFDGLPDT VDNCTYGLGG APADCRGADT PAEFDRQWPK TVAAILAMNP
DVLGLNELEN DGYGPDSAIA FLVNKLNEAT APGTYAFIDA DAATGQVNAL GTDAIKVGLI
YKPARVTPVG QTAVLNTPAF VNGGDSAPRN RASLAQAFRQ NDNGAIFIVN VNHLKSKGSP
CDLPDQGDGQ GNCNAVRTRA VQQLVAWLAT HPTGIADPDI LLIGDYNSYA QEDPIATLKK
AGFINLLEAR LGPDAYSYVF DGQWGYLDYA LASASLNAQV SGVAEYHINA DEPNVLDYNT
NFKTPNLQVL LYAPDQYRTS DHDPVVVGLN LRGEPQPPAR P
|
|---|
| |