Gene Mrub_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0208 
Symbol 
ID8878275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp179226 
End bp181430 
Gene Length2205 bp 
Protein Length734 aa 
Translation table11 
GC content66% 
IMG OID 
ProductMMPL domain-containing protein 
Protein accessionYP_003506008 
Protein GI291294610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.46376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCCC CCCTGGCCCG CCTGGTTGCC CGCTATCCTG TACAGATCGT TCTGGTGTGG 
CTGTTGCTGG TGCTGTTGGC CATACCGGCT GCCCGGCTGG CCCCGCAAAA CCTGGCCGCC
AACGCCAGCG CTGTAAAAAA CAGCGAAGCC CAGAAGGTTT TGCAGATCTT GACCGAGGCC
TTTGGTCTAC CTCCGGTCGA CCGTACGGTG CTGGTCAGTG AATCCAGCCT ACCTGAGCAC
GACCCCCGCT TTCGCCAGAC CTACAACCAA CTGATGGCCC GGATGCAGAC CCTGGAGGGG
GTGCTGCGGA TTCACCGCTA CGACGCGCCC AGCCCGCTCC AGCAGCAAAG CCAGGATGGC
AAAATAACCG CCACCCTGCT GGACACGCGC CTGGAGAACG GCGAGGCCGT GATCGAGGCT
TTGAGACGGG AAGCCAGGGC TGCCCAGACA CCCGAAATTC GCTTTTATGT CACCGGGGCC
ACCGCCGTTA CCAAGGACTT TTTGCACCTG CTGGAGGCCG ATGTCAAGCG CAGCGAACTG
ATGGCCCTGC CCTTAACCGG GCTGGTGCTG CTCCTGGCCT TTGGCGCCCT GGTGGCGACC
GGCCTGCCCC TTTTGGTGGG GGTGGTGGCC ATCACCACCG GCCTGGCCTG CTTGTTTTTC
CTGACGCTTT GGGGCGAGGT GAGCAGTTTT GCGCTTTCGG TGATTACCAT GCTCTCGCTG
GGCGCGGGCA TCGATTACGC CTTGCTGATG GTCAATCGCT TCCGTGAGGA ACTGGCCGCG
GGCCGCCCGG CGCAGGCGGC GGCCGCCATC ACCACCCAGA CCGCCGGCCG CACGGTGGCC
TTTAGCGGGC TGGTGGTGGC CATTGCCATG GGGGCCATGC TGGTGCCCGA TCTGACCTTT
ATCCGTTCGA TGGGGGTGGG CGGGGTGATG GCCATTACCC TGACGGTGCT GGTTTCCATC
ACCCTGCTCC CGGCCCTTCT GGCCTTGCTG GGCGAGCGGG TTAACGCGCC ACGCCGCTGG
GCCTTCAAAC CCACCAGCAG CGGGAAGGCC AGCCCCTTCT GGGGTCGGTG GGCTAGCGTG
GTGATGCAGC GCCCCTGGAT GTGGTCGTTT GGGGTGATGG GGCTGCTTCT GGCGCTGGCC
TGGCCGGCCA CCCAGATGAA GCTGGGCTAC ACCGGCGCGT TTGGACTGGG CCCCCATGTG
GAGTCACGCA AGGGCCTGGA GCTCATCCGA CAGCTCGAGC TCGGGGGGGC GCTGGACGCC
TTCGAGGTGC TGCTCGACCT GGGCGAGGAG GGCTTTACCC CTCAGAACCG GGCCCGCTGG
CGGGCGCTCG AGCAGCGTCT TTCGGCCTGG CCGGAGGTGC GGCTGGTGGT CTCGCCCTTC
CTGGCGGGCC GCCTGGAAGG CCAGGGCGGG TTTGCTGAGC TGGTGGGCCT CACCAACCAG
TACATCAGCC AAGACCGCCG CTACCTGCGT CTTACGGTCA TTCCCCGCGA CGCTGTTCAC
GCCCCTAGCA TCCCCGATTG GTATGCCCGC CTCAAACAGG AAGCGCAGCA GGCTGGGTTC
CAGCGGGTGC TGCTGGGCGG CGCGCCGGTG GGTTCGATGG AGTTTACCCA GGCCCTGGTG
GGGGCCATGC CCGCTGCCAT CGGGACGGTT TTTGTGGCCA CCTTCCTTTT GCTGGCGGTG
GCCTTTCGCA GCCTGGTCAT CCCCCTCAAG TCCATCCTGA TGAACACCCT GACGGTGGGG
GCGGCCTATG GCCTCATTAC CCTGGTGTTT CAGGAGGGGT TTGCAGCGAG GCTGGTGGGT
GCGCCCACCG ATGTGGGGGG CATCGACAGC TCGCTCCCGA TCCTGATGTT TGCGGTGATT
TTTGGGCTTT CCATGGACTA CGAGATCTTT TTGCTCTCCC GCGTGCAGGA GGCCCACCTG
GCCGGGCTGG ACACCCCCCA GGCCGTGCGC TACGCCCTCG AGCGCACCGC CGGGGTAATT
GGCAGCGCCG CCCTGATTAT GGTGATCGTC TTCTCGGCCT TTGTGGTGGG GCAGGTGGTG
GCCAACAAGA CCATTGGTCT GGGACTGGCG CTGGCGGTGC TCCTGGATGC CACCCTGGTG
CGGCTGGTGC TGGTGCCGGC GGTGCTGGTG CTGGCGGGCC GGTGGAACTG GTGGTTGCCC
GAGCCGCTCC AGCGGGTCAT GCCTAGGGTG CGCCTCGAGC CGTAG
 
Protein sequence
MLAPLARLVA RYPVQIVLVW LLLVLLAIPA ARLAPQNLAA NASAVKNSEA QKVLQILTEA 
FGLPPVDRTV LVSESSLPEH DPRFRQTYNQ LMARMQTLEG VLRIHRYDAP SPLQQQSQDG
KITATLLDTR LENGEAVIEA LRREARAAQT PEIRFYVTGA TAVTKDFLHL LEADVKRSEL
MALPLTGLVL LLAFGALVAT GLPLLVGVVA ITTGLACLFF LTLWGEVSSF ALSVITMLSL
GAGIDYALLM VNRFREELAA GRPAQAAAAI TTQTAGRTVA FSGLVVAIAM GAMLVPDLTF
IRSMGVGGVM AITLTVLVSI TLLPALLALL GERVNAPRRW AFKPTSSGKA SPFWGRWASV
VMQRPWMWSF GVMGLLLALA WPATQMKLGY TGAFGLGPHV ESRKGLELIR QLELGGALDA
FEVLLDLGEE GFTPQNRARW RALEQRLSAW PEVRLVVSPF LAGRLEGQGG FAELVGLTNQ
YISQDRRYLR LTVIPRDAVH APSIPDWYAR LKQEAQQAGF QRVLLGGAPV GSMEFTQALV
GAMPAAIGTV FVATFLLLAV AFRSLVIPLK SILMNTLTVG AAYGLITLVF QEGFAARLVG
APTDVGGIDS SLPILMFAVI FGLSMDYEIF LLSRVQEAHL AGLDTPQAVR YALERTAGVI
GSAALIMVIV FSAFVVGQVV ANKTIGLGLA LAVLLDATLV RLVLVPAVLV LAGRWNWWLP
EPLQRVMPRV RLEP