Gene Mrub_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrub_0168 
Symbol 
ID8878235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus ruber DSM 1279 
KingdomBacteria 
Replicon accessionNC_013946 
Strand
Start bp147700 
End bp148938 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content65% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003505968 
Protein GI291294570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGC TGTTCCTAAC CCTGGCAGCC CTGGCCCTCG GCACCGCGGG GCTGGCCCAA 
TCGGGAAAGC TGGAGATCTT TTCCTGGTGG GCCGGCGACG AAGGCCCCGC CCTGCAAGCC
CTGATTGACC TGTACAAGAA GCGCTACCCC AACGTAGAGG TCATCAACGC CACCGTCACC
GGCGGCTCCG GCGTGAATGC CCGGGCCGTG CTCAAGACCC GTATGCTGGG CGGCGACCCC
CCCGATAGCT TCCAGGTGCA TGCCGGGCAG GAGCTGATCG GCACCTGGGT GGTGGCCGAC
CGCATGGAAG ACCTGACCCC CCTGTTCAAC CAGGAGGGCT GGATGACCAA GTTCCCCAAG
GGGCTCATTG ACCTGCTCTC CTACAAGGGC AAGATCTACA GCGTGCCGGT CAACATCCAC
CGCTCCAACG TGATGTGGTA CGTTCCGGCC AAGCTGCGCG AATGGGGGGT GCAGCCGCCC
AAAACCTGGG CCGAGTTCCT GACCGTCTGC CAGACCCTGA AGAGCAAGGG CCTCGAGGCC
CCCCTGGCCC TGGGCGAGAA CTGGACGCAA CAACACCTGT GGGAGTCGGT GGCCCTGGGC
GTGCTGGGCG CCACCGACTA CGCCAACCTC TGGACCGGTA AGCTGCGCTT CAACGACCCC
AAAGCAGTGG CGGTGTGGAA CACCTTTGGC CGGGTGCTGG ACTGCGCCAA CAAGGACGCC
TCGGGCCTGA GCTGGCAGCA AGCCATAGAC CGGGTGCTCG AGGGCCGGGC CGCCTTCAAC
ATCATGGGCG ACTGGGCCGC CGGCTACATG ACCACCACCA AGGGCCTCAA ACCCGGTGAA
GGTTTCGGCT GGGCCCCCGC CCCCGGCACC GCTGGCGTGT TTATGATGCT CTCCGACTCC
TTCGGCCTGC CCAAAGGCGT AAAGAACCGC ACCAACGTGC TCAACTGGCT GCGGCTTTTG
GGCTCTAAAG AAGGCCAGGA CACCTTCAAC CCGCTCAAGG GCTCCATTGC CGCCCGCACC
GACTCCGACC CCAGCAAATA CAACGCCTAC CTGCAGTCGG CCATGCGCGA CTGGAAGTCC
AACCGCATCG TAGGCTCGCT GGTGCACGGC GCGGTGGCCC CCGAGTCCTT CATGAGCCAG
TTTGGCACCG TAATGGAAAT CTACCTCTCG AGCCGCAACG CCCAGGCCGC GGCCAACGCC
GCCCAGGCCA TCGCCACCCA GGTGCGTCTG GGTCAGTAA
 
Protein sequence
MKKLFLTLAA LALGTAGLAQ SGKLEIFSWW AGDEGPALQA LIDLYKKRYP NVEVINATVT 
GGSGVNARAV LKTRMLGGDP PDSFQVHAGQ ELIGTWVVAD RMEDLTPLFN QEGWMTKFPK
GLIDLLSYKG KIYSVPVNIH RSNVMWYVPA KLREWGVQPP KTWAEFLTVC QTLKSKGLEA
PLALGENWTQ QHLWESVALG VLGATDYANL WTGKLRFNDP KAVAVWNTFG RVLDCANKDA
SGLSWQQAID RVLEGRAAFN IMGDWAAGYM TTTKGLKPGE GFGWAPAPGT AGVFMMLSDS
FGLPKGVKNR TNVLNWLRLL GSKEGQDTFN PLKGSIAART DSDPSKYNAY LQSAMRDWKS
NRIVGSLVHG AVAPESFMSQ FGTVMEIYLS SRNAQAAANA AQAIATQVRL GQ