| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2821 |
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| Symbol | |
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| ID | 8829233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | + |
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| Start bp | 175209 |
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| End bp | 177692 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | type IV secretory pathway VirB4 components-like protein |
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| Protein accession | YP_003494773 |
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| Protein GI | 290243103 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.901669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAACG TCAGCAAGAC CCGCCCGGAC CAGGATTACC AGCAGACACA TCGGCCGCTG
GCTGAATTGC TACCGTGGAT GGCACTCATC ACCGACGGTT GTGTGATGAA CAAGGATGGT
TCCGTGCTCG TAATGTTCGA ACACGAGGGG TTTGATCGCG AGGGGGTAGA TGCACTGGAG
ATCAATACGC TGGTGGAGCG CATTGAATCC GCGATGGTGG TGCTGGATGA AACCTGCACG
CTCTGGTGGA CCACTCAGCG TCGCGAAATC GACCCGGACC CCGGTGTTCG GTCTTTCGAT
AACCCCATTG CCGACTACGT TGACCGGGCC TGGGTGAAAA ACCTCCACAG TCGCCGCGCC
TACAAGCACC GAAACTACCT GGCGATCAGC TTCGCGAACG TCAAAGGCTC TTCGCGTTTC
TTTGACCTGT ATGCGAAAGC GACCGCGGAT GGCATGCCGG CTCTGAAAGC CCTGATGCAG
GCCGCCACGA TTGCCTTGCA GTCGAAGGAT CGCCTGCTGT TTGAGGCGGA GGAGGTCACG
CACTGGATTG ACAAAATCGA GAATACCGTC GATCAGTTTA CCGCATCCCT GAAGACGCTC
CAGCTGAGGC GCCTGAAGGG GAAGGAGCTG CTGGCTGTGC TGCACCGAAC AGTATCGCCG
TCGTCCAAGC AAAAGCTGGT CGCCCCGGAC CCCGATCAGG CCTATCTCGA TAGCTACCTG
GGCGAGGACG CGGTGACGGT CCACCCGCGG TACCTGAAAT TCTCAGGCCA CAAAAATCGC
TACGCCGCAA CGGCGAGTGT GAAATCCTGG CCCCACTACA GCACACCGGG GATCTTCGAC
TCGATCCAGA AGGCGGACGC GGAGCTGGAT TTTACGGTGG CGTTCCGCGT GCAGAGCAAG
GAAAGCGCTC GCGGGTACAT AGAGGATGTG CGCCGCCACA ACGCGAATTT CGCCAAGTCC
CTTTTCGGGT ACGCCAAGGA GGCGTTTACC CAATCGGACA CGGCGACGAT CGACAACACC
CGTCTGATTC AGTCAGAGGA GGCGGATGAC GCGCTAACCG ATCTAGGGGC GGGCGGGTCG
GCCGGCTACC TGCTCGCAAC ACTCACGGTC TACGCCCAGT CGCCGAAGCA TTTGGAGCGC
GACTACAACG AGACGATGAA GCTCCTGCAC GAAGCGGAGT TCGTGTTGAT GAGGGAGACG
ATCCACTTGC TGTCGGCTTG GTGTGGGCAC ATCCCCGGGC AGATGAAAGA ACCGGTCCGA
TGGATGTTCG TGTCGGGGCG CAACTATGCA GACTCCATAC CGCTGAGAGC GATCCGAACA
GGTTCTCGGA CCAATCACTA TCTCACTCAG CAGCGCGGAG AGGAGACCGG TGCTTTGACG
GCGTTAGAGA CTGAGCATCG GATTCCGTAC TTCTTCAACT TCCACGAGAC GGATCTTCCG
CATGGGTTCG TGATCGGCCC TAGCCGCGCG GGTAAGTCGG TTTTTATGAT GTTTCTGGCA
TCCCAGTGGA ACCGCTACGC ACCGAGTCAG GTGTTCATTT TCGACAAGGA TTTGACCTGC
CGAATCCCGA CCTACCTGCA CGACGGCAAG TATCTCTGGC TCGGGAAAGA AAACACGGCG
ATGAACCCGT TGTCGCAGCT CGACAGTGAA GAAGACTTGA CCTGGTTTGC GAGCTGGGTG
GAAACGCTGA TCGAGTCCCG CGGGTACCAG ATTAAGGCGG AGGACGAAAA ACTGATCTGG
CAGGCCGGCA AGGAAGTGAT GGCACTCAAG GAGGCAGGGG AAACGGTCAC ACTGTCGAGC
TTCGCCTTGC ATCTTCCGGT GCATCTGGCC GAGGAATTGG AACCATGGGT CGGGGATGGT
GGAAAGGCCT CGATGTTCGA TAACGAGGAA GATGCGCTGT CGCTGGCAGA CTGGACAGCA
ATGGAGATGG GACAGCTATT CAATGACGAG CGTGCTGCCC GGGCATTTAT GGACTATGCC
TTCTATAGGA TTTACCAGCG TCTCGATGGG CGTCCCACGC TGATCTACAT CGAAGAGGCG
TGGTTCATGC TGGCCGATGA GCGGTTTGCG GCGAAGGTGA ATGACTGGCT TCGGACCCTC
GCCAAGAAAA ATGCAACGCT CATTATGGCA ACACAATCCC TCGAGGAGCT TGCGCAGAGC
TCGGCATTCG TCTCGATGGT CGACAACATC CCCAATCGGA TCTTTCTCTC GAACGCCAAC
GCCCGCGCCT CCAAGGAGCT CTACACCAAG CGTTTCGGGC TCACCGATGC CCAGGTCGAG
CGTATCCGTA CCATGACACC CAAGATGCAG TATTACATCT GCACGCCGAA GGCTTCCCGG
ATGGTGGAAG CACAATTCCC GCCGCATGTG CTGGCGTACC TTCGATCCGA CGCGAAGGCG
CAAAAAGTGT TCAACATGGC CCGTGAGAGC CATCCGGAAA AATGGAAGGA GGTCTACCAT
GACCGCATGC AGGAAGAGAT CTGA
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| Protein sequence | MLNVSKTRPD QDYQQTHRPL AELLPWMALI TDGCVMNKDG SVLVMFEHEG FDREGVDALE
INTLVERIES AMVVLDETCT LWWTTQRREI DPDPGVRSFD NPIADYVDRA WVKNLHSRRA
YKHRNYLAIS FANVKGSSRF FDLYAKATAD GMPALKALMQ AATIALQSKD RLLFEAEEVT
HWIDKIENTV DQFTASLKTL QLRRLKGKEL LAVLHRTVSP SSKQKLVAPD PDQAYLDSYL
GEDAVTVHPR YLKFSGHKNR YAATASVKSW PHYSTPGIFD SIQKADAELD FTVAFRVQSK
ESARGYIEDV RRHNANFAKS LFGYAKEAFT QSDTATIDNT RLIQSEEADD ALTDLGAGGS
AGYLLATLTV YAQSPKHLER DYNETMKLLH EAEFVLMRET IHLLSAWCGH IPGQMKEPVR
WMFVSGRNYA DSIPLRAIRT GSRTNHYLTQ QRGEETGALT ALETEHRIPY FFNFHETDLP
HGFVIGPSRA GKSVFMMFLA SQWNRYAPSQ VFIFDKDLTC RIPTYLHDGK YLWLGKENTA
MNPLSQLDSE EDLTWFASWV ETLIESRGYQ IKAEDEKLIW QAGKEVMALK EAGETVTLSS
FALHLPVHLA EELEPWVGDG GKASMFDNEE DALSLADWTA MEMGQLFNDE RAARAFMDYA
FYRIYQRLDG RPTLIYIEEA WFMLADERFA AKVNDWLRTL AKKNATLIMA TQSLEELAQS
SAFVSMVDNI PNRIFLSNAN ARASKELYTK RFGLTDAQVE RIRTMTPKMQ YYICTPKASR
MVEAQFPPHV LAYLRSDAKA QKVFNMARES HPEKWKEVYH DRMQEEI
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