| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2777 |
|---|
| Symbol | |
|---|
| ID | 8829189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013930 |
|---|
| Strand | - |
|---|
| Start bp | 133817 |
|---|
| End bp | 135079 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003494729 |
|---|
| Protein GI | 290243059 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0260202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 75 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGATT CACACCCAGA AATCCGTGAA ACATCTCCAG CGGCAGCGCC GGTAGGGGCG
ACGGATGGCT ACCTCCTCCC TTGGGGTCAC CCCGAGGGTT GGCCCGCAAT CCCCAATGGA
GTGCGGGGCC GGTACCGCGC GCCGACTGAG GCATGCCTTC TCGAGGCCAA CACGGACCGT
GAGGCCGTGG CCGCATGGTT GGACCGCAAG GGATCGGCCT CCCCTTCCAC GCTTGCCGCC
TATCGGCGCG AGGTTTCTCG CCTGCTACTG TGGGCCGCCG AACTAAGGGG GAAGGCTCTA
AGTGATCTGG GGACTCAGGA CTACCGGGCC TACCAACGTT TCCTGGGCGA CCCGCAACCG
CGGGACCGCT GGGTAGCCGA CGGAGGGCGC AAGTGGGCTC TGGGCGCTCC GGGGTGGCGC
CCGTTCTATG GCGATCTGAC CGCCCAGAGC CAGGAGTACG CCTTGCGCGT CATCCGGGAC
CTGCTGAGCT TTCTTGCTCA GGCCGGGTAC CTGATTGGAA ACCCTCTCGC ACTCATCAAC
ATCTGTGCGC ACGCGCACAA CGAGTCGGTT GCGGTCCAGC GCGCCCGGGC ACCCCGACGG
CGCGCGCTGG GTCGAAGGTT GTGGATCCGT CTTCAGTCTG CGGTGAATAA CTGGCCGGAA
AAGACGCCGC AGGCTCAATT TGAGAAGGCT CGGGCTCGCT GGATGCTGAC ACTGATGTAC
GCACTGGGGC CACGAATCAG CGACCTGCGG GGCTCGTTCG GGGACATCCA CCGGGAAGCG
GTAGGCGATC GCGACCTGTG GATCTGGTCC ATCGCGGGCA AAGGCGGAAA GTTCGCCCAG
CTCCCCCTCC CCTCCCCTGT CGTCGATGAG ATGGTTCGGT TTCGAAAATC CATCGGGATT
CCCGCGTTTC CCGTCGACGG GGAGACGACG CCGTTGGTGC CCCGCTCCAC CGATACCAAC
CGCAATCGGC CGCTCACCCG TCAAGGGCTC GACCGTATTG TCCGGCAAAC GCTGGACTCG
GCCGCGCAGC AGGCATACGA CGACGGCGAT CCGGAGGCTG CCGAGCGCCT CAGCCGAGCG
AGCGCGCACG CACTTCGGCA CACGGCCGCC ACCGACATAC TCGAAAGCGG TGTCGATATG
AGGGTCGCGG CTGACCTGAT GCGGCATTCC GACATTCGCA CGACCCAAGG CTACACCACA
CCCGAACTCT CACGCCTCAT GGACGCACTT GATCAGCGCG ATCTCGAATG GCGCGATCAT
TAG
|
|---|
| Protein sequence | MNDSHPEIRE TSPAAAPVGA TDGYLLPWGH PEGWPAIPNG VRGRYRAPTE ACLLEANTDR
EAVAAWLDRK GSASPSTLAA YRREVSRLLL WAAELRGKAL SDLGTQDYRA YQRFLGDPQP
RDRWVADGGR KWALGAPGWR PFYGDLTAQS QEYALRVIRD LLSFLAQAGY LIGNPLALIN
ICAHAHNESV AVQRARAPRR RALGRRLWIR LQSAVNNWPE KTPQAQFEKA RARWMLTLMY
ALGPRISDLR GSFGDIHREA VGDRDLWIWS IAGKGGKFAQ LPLPSPVVDE MVRFRKSIGI
PAFPVDGETT PLVPRSTDTN RNRPLTRQGL DRIVRQTLDS AAQQAYDDGD PEAAERLSRA
SAHALRHTAA TDILESGVDM RVAADLMRHS DIRTTQGYTT PELSRLMDAL DQRDLEWRDH
|
|---|
| |