| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2770 |
|---|
| Symbol | |
|---|
| ID | 8829182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013930 |
|---|
| Strand | + |
|---|
| Start bp | 123325 |
|---|
| End bp | 125796 |
|---|
| Gene Length | 2472 bp |
|---|
| Protein Length | 823 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | DNA gyrase, A subunit |
|---|
| Protein accession | YP_003494722 |
|---|
| Protein GI | 290243052 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG TAATCGACCC TGAAGCCGGT GCGTCGAACG CGCCGCTGGA ACTGGAAATC
GGGAACGTGA TGCGGTCCTC CTTCGCGGAC TATGCGATGT CCGTCATCAC GGACCGTGCC
CTGCCAGATG CCCGGGACGG CCTCAAGCCG GTCCATCGCC GCATCCTATA TTCGATGCAC
CAGCTCGGTA TCACACACAT GGTGGCGCAC AAGAAATCGG CGCGCGTCGT CGGGGATGTG
CTGGGCAAAT ACCACCCGCA CGGGGACTCC GCCTGCTACG ATTCGGCCGT GCGCATGGCG
CAGCACTGGG CGATGCGGCA TCCGCTCATC GACGGCCAGG GCAACTTCGG CTCAATCGAC
GGCGACAATG CCGCGGCCAT GCGCTACACC GAAATGCGCC TGTCGAAGCT GGGTACGCGT
CTGTTCGCCG ACATCCAGAA GAACACGGTC GACTTCCGCG ACAACTTCGA TGGCACGGAG
CGCGAACCCG AGGTTCTCCC CCTCACCTAC CCCAACCTGC TGGTCAACGG ATCCGAGGGC
ATCGCGGTCG GTATGGCAAC CTCGGTGCCG CCGCACAATC TCCGGGAAAC CGCCGACGCC
TTCTTGGCAT GGCTCGACAA CCCCGAAATC ACCACGCGCG AGATCGCGCA GCACATGCCC
GGCCCGGACT TCCCGACCGG GGGCATCCTG CACGACCTGG ACGGATACAT TCAGGCGCTC
GATACCGGCC GCGGCGCCGT CAAGCTCCGC TCGCAATGGA CGGTCGAAGA CCGCCCGCGC
GGGGGATCAC GTCTGGTGAT CGACCAAATC CCGTATGCGG TGAACAAGGC GAAGCTGGTG
GAACAAATCG CCGAGCTGGT GCGTGAGAAG AAGATCGAAG GGGTTGCCGA TCTGCGGGAT
GAATCCAACA AGAAAGGCAT CCGCATCGTG CTCGAGATCA AGCGGGAGTT CGAGGCCGAG
GCGATTGCGT TCCAACTGGT AACGATGACC CAGCTGGAAA CCAGCGTACG CTACAACATC
ATGGCGCTGG TGGGGCAAAC CCCTATGCAG CTTGGCGTAC GCGACCTCTT TGAACACTTC
CGAGCACATC GTATCGAGGT GATTCAGCGC CGCACCCAGT TCGACCTCGA CCGGGCGCTG
GATCGACTGC ATATCCTCGA AGGCCTACTG ATGGCGCTGG ACCGTCTGGA CGAGACGATT
GCGACAATTC GTGCCAGCGC CGATGCCGAC GAAGCGCGAG GCGGACTGAT CGATCTGCTG
GGGATCGACG TGACGCAGGC TCAGGCCATC CTCGATATGA AGCTCCAGAA GCTCACGGGC
TTGCAGATCC AGGATATCCG GGACGAGCAC GACCGACTGA CCGCCGAGGT GGCAGATCTT
CGGGACATTC TGGCCCGCAG TGAACGCCAG GTGGAGATCA TGCGCACGGA GCTTCTGGAT
CTGTGCGACC AGCACGCGAA TGAGCGCTGC ACCGAGATCG ACACCTCGCT CTCGAAGGTT
TCCGCGGCCG ATCTCATCCC CGAGGAAGAC GTAATGTTGA TCGGAACGCA GCAGGGATAC
CTCAAGCGCA TCGCCGCCAA GGACATGAAT CGTCAGAACC GGGGCACGAA GGGTCGCTCT
ATCATGTCGG TGGGTGAGGA TGACCTGGTT ACGACGTTTC ACGCAGGGCA TAGTCACGAC
ACCCTGATTG CCCTGACCGA TAGCGGTCAG GTCCATGCGA TCAAGGCCTA CGACATCCCT
GATACCGGGC TGGGCAACAA GGGGCGGCAC TACCGAAACG TGTTTGAAGG CGTCGAGGGG
AACGTGGTCG CCATGCTGAC GGTGGACGGC CTCGAGAGCG TGACCCATTC GCTCGTCATC
TTCACCGCCC AGGGGCTCGT CAAGCGAACC CCATTGTCCG CGTACTCCAA TGCGACGCGC
CGAGGCGGGA TTCAGGGAAT ATCACTTGTT GAGGGTGACT CAATTGTCTG CGCCCGTGTC
TCGAAGGACG AGCCAAATGA GAGCGTGATC GTCGCGGCTG ATAATGCAAA GGCAATCCGC
TTCGGTATGG AAGAAGCCCG TGCGATTGGG CGTACCAGCC GGGGAGTTCG CGCAATGAAC
CTGTCAGAGG ACGCCCGTGT CGTGGCCGGC GACATTATTC ACGCCGATGA TCTGGAGAAG
GCGCACCTCA TGGTGGTCTC CGAAAAAGGC CTCGGTAAAG CGACGCCGGC CAGCGAGTTC
CGGTTACAAT CCCGCGGCGG CAAGGGGGTC ACCTCTTACA CGCCGAACAA ACGATCCGGT
CCGGTGGTGG CCGCGACAGT GCTCTTCGAG GGCGCTGACG TGGTGCTGTT CAATGACCAG
GGTGGTGCCA ACCGGATTGC CGGCTCGGAT GTGCCACACA ACGGCCGCGC CACCACCGGT
TCCGCCATCA TCCGCAACGG ATCGGTTCGC AACGTATTGG CGGTCCCGCC GCCGGTCGAA
GAAGATCAGT AA
|
|---|
| Protein sequence | MTEVIDPEAG ASNAPLELEI GNVMRSSFAD YAMSVITDRA LPDARDGLKP VHRRILYSMH
QLGITHMVAH KKSARVVGDV LGKYHPHGDS ACYDSAVRMA QHWAMRHPLI DGQGNFGSID
GDNAAAMRYT EMRLSKLGTR LFADIQKNTV DFRDNFDGTE REPEVLPLTY PNLLVNGSEG
IAVGMATSVP PHNLRETADA FLAWLDNPEI TTREIAQHMP GPDFPTGGIL HDLDGYIQAL
DTGRGAVKLR SQWTVEDRPR GGSRLVIDQI PYAVNKAKLV EQIAELVREK KIEGVADLRD
ESNKKGIRIV LEIKREFEAE AIAFQLVTMT QLETSVRYNI MALVGQTPMQ LGVRDLFEHF
RAHRIEVIQR RTQFDLDRAL DRLHILEGLL MALDRLDETI ATIRASADAD EARGGLIDLL
GIDVTQAQAI LDMKLQKLTG LQIQDIRDEH DRLTAEVADL RDILARSERQ VEIMRTELLD
LCDQHANERC TEIDTSLSKV SAADLIPEED VMLIGTQQGY LKRIAAKDMN RQNRGTKGRS
IMSVGEDDLV TTFHAGHSHD TLIALTDSGQ VHAIKAYDIP DTGLGNKGRH YRNVFEGVEG
NVVAMLTVDG LESVTHSLVI FTAQGLVKRT PLSAYSNATR RGGIQGISLV EGDSIVCARV
SKDEPNESVI VAADNAKAIR FGMEEARAIG RTSRGVRAMN LSEDARVVAG DIIHADDLEK
AHLMVVSEKG LGKATPASEF RLQSRGGKGV TSYTPNKRSG PVVAATVLFE GADVVLFNDQ
GGANRIAGSD VPHNGRATTG SAIIRNGSVR NVLAVPPPVE EDQ
|
|---|
| |