| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2695 |
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| Symbol | |
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| ID | 8829107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | - |
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| Start bp | 58214 |
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| End bp | 60172 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | DNA ligase (NAD(+)) |
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| Protein accession | YP_003494648 |
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| Protein GI | 290242978 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.278401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.204857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACG AACTGGCACT GGAGAGCACC GTCATGGATG ACACCGTGGA GCTGCCCACA
GGCTTCAAGC ACCCCCGCGA CTGCACTGTG GATGAACTGG CGACCGCCTG TGAGCGCCTG
AACGCCTCCT ACCGCGCCGG GCAGCCCCTG GTGCCGGATG CGGTCTACGA TCACCTGTTC
ATCGCCACCC TGTCGGAGAA AGACCCGGAG CATCCGTTCC TCAAGGCGGT GGAACCTGAG
GGGGAAGCCT TCGAGGGTGA TACGGTCAAG CATGACACCC CGATGCTCTC GACCGACAAG
GCCTACACCG AGGACGAGCT TCGCCGCTTC CTTGGGCGGG TCGAGGTCGC TGCCGAGGCG
CTGGGCATCC GCTCCGAAAC CCTGACGTTT CGGATGACCC CGAAGCTGGA TGGCATTGCC
GGAATGCAGC GCCCGGATGG CCGCCTGGTC ACACGCGGCA ACGGTTTTGC CGGAGCCGAC
ATCTCCCACG CCTTTGAGCG CGGTCTGCGC ACGCCGGATG GCTCGATGGA GCCGGGCCCG
GGCGAGCTGG TGCTGGAGGA GATGTTCTTT CAGGACGAGA TTCGGGTGGC CTTCGGCATG
CCGCATCCGC GCAATTTCGT CGCGGGGTTT GTCGGGGCCG ATACGGTCAA GCCGCATCAT
CAGAAGGCGG CGGATGCTCA AGCCATCATC TTCTTCCCCT ATCGCCAGCT TCCCGCGTGG
CAGGCGTCGG CCGCCGTCGT GATGGCAAGC TGGCAGGAAC GCATGGAGGC GCTGCGTCAG
GCCGTGCCGT ACCGCACGGA CGGGGTTGTG CTGGAGGTCA CGGATGAGAC GGTGAAAGCC
CACATGGGCT CCACATCCCA CCATCATCGA TGGCGAGTCG CGCTCAAGAC CAAGGGCGAG
GTCGCTCATG TCCGTGTGCG CGACATTCGC ATCCAGACCG GGCGCACTGG GCGCATTACC
CCGGTGCTTG AGTTCGATCC TGTGCTTCTG ACCGGGGCGC GCATCTCGAA CGTGACCGCC
CACACTGCGG CTAATCTGGC CCAGCAGGGG CTCGGGGTCG GGGCCGAAAT CGAGATCAGT
CGCGCGGGCG ACGTGATCCC GAAGCTGGAG CGGGTTCTGG AACCGGCGTC TGAACCGATG
ACCGTGACCC ATTGCCCGTC CTGCGGACAC GAGGCTGAGG TCGAGGGCGA GTACGCGGTA
TGCCCGAATA CCGTGGGCTG CCTGGCCCAG GCCGAAGCGC GGCTACGCCA CTTCTTTCAC
GTCATGGGCA ATGCCGATCT GTTCGGGCCG AAGACCGTTG AGGTCTTGGT CGAGAACGGG
CATACGGATC TGCGCGGTTT GTTCGATCTG AACGCTGTGG CCTTTGTGAG CATGGGGTTC
GGCCCCGGTC AGGCCTCCAA CCTCGTGCGG GAACTGGCGC GATGCCTCCG AGAGGCTGTG
CCGGACTGGC GATTCCTGGC CGCACTGGGT CTGCGTCACC TCGGGCGCGG CGACTCGCGC
AAGCTGCTGG CGGTCTACCC GCTGGAGTCG ATCACGAACC TGACGGCCGA GGACATCGCG
GCGGTGGAGG GGTTTGGCCC CATCACCTCC GCATCGATCG CCGAACAGTT GCAGGAGCAG
CGCGAGCGCA TCGAGGCCAT GATTCGTCTG GGCTTCAATC TGGAGCGCAC GCCGCTGGCG
GGCGAGGGCG CCGCGGCCGA AGGCCCGCTG GCGGGGCAGT CCATCGTGTT CACCGGCACC
CTGACCCTCG GGAGCCGGGG CGAGCTGGAG GAGCAGGCGC GCGGACTAGG CGCGACGATC
CAATCCGGCG TGAACTCCAA GACGACGATC CTGGTATGTG GTGAAAAAGC GGGCTCAAAG
CGCAAGAAGG CCGAAGCCAT CAACGAAAAA GCGGGCAAGG AGCAGGTTCG GATTCTGGAT
GAAGCGGCCT GGGCCGCCCA AATGGAAGGG GGCAAGTAA
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| Protein sequence | MNHELALEST VMDDTVELPT GFKHPRDCTV DELATACERL NASYRAGQPL VPDAVYDHLF
IATLSEKDPE HPFLKAVEPE GEAFEGDTVK HDTPMLSTDK AYTEDELRRF LGRVEVAAEA
LGIRSETLTF RMTPKLDGIA GMQRPDGRLV TRGNGFAGAD ISHAFERGLR TPDGSMEPGP
GELVLEEMFF QDEIRVAFGM PHPRNFVAGF VGADTVKPHH QKAADAQAII FFPYRQLPAW
QASAAVVMAS WQERMEALRQ AVPYRTDGVV LEVTDETVKA HMGSTSHHHR WRVALKTKGE
VAHVRVRDIR IQTGRTGRIT PVLEFDPVLL TGARISNVTA HTAANLAQQG LGVGAEIEIS
RAGDVIPKLE RVLEPASEPM TVTHCPSCGH EAEVEGEYAV CPNTVGCLAQ AEARLRHFFH
VMGNADLFGP KTVEVLVENG HTDLRGLFDL NAVAFVSMGF GPGQASNLVR ELARCLREAV
PDWRFLAALG LRHLGRGDSR KLLAVYPLES ITNLTAEDIA AVEGFGPITS ASIAEQLQEQ
RERIEAMIRL GFNLERTPLA GEGAAAEGPL AGQSIVFTGT LTLGSRGELE EQARGLGATI
QSGVNSKTTI LVCGEKAGSK RKKAEAINEK AGKEQVRILD EAAWAAQMEG GK
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