| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2687 |
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| Symbol | |
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| ID | 8829099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | - |
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| Start bp | 51614 |
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| End bp | 53992 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003494640 |
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| Protein GI | 290242970 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0299536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.27507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAATCGC AAACGGACAT TGCGTCATCG CGGACAGGCT CAACGTCCGC CATCATTCTC
GGTTTTGGCT TCGTTCTCTT TCTGCTCCTG ATCCTGATTT GGATCGGGAT GGATCGCTTG
GCGCATGCGC AATCGCAGAA GCAGCAGCTG GTTACTTCTA ATACGACGCT TCAGCTCCTT
TACGAGGCAC GCCACGCGGC ATTAAACCGG ACTTCCTACC TCATTCAGGC GTCACTCTCT
CGGGAAGACG CCGACGCGTT CGAAGGCTTT GCGCAGGCGG ATCATCGTAT TGACGTATTG
CACGACGCGT ATCGTCAGTT GGTCGACTCC GAAACAGCCG CATCCGATGA GTATCAGGCC
TGGCAATTGG CCCTGGCGGA CACGGGATTC TCCCAGGGCC TCGCGCTTGA GCGGGCTGCA
CTGGGCGCGC TTCCGATCGA GGAACTGGAT GCGTTCCTCC CACGTCACGC CGAGCTCGAT
GCGTTTTTTG GGGAGCTGAT GCGGCGCCAC GCCGAAGCGG CGGACTCGCT CCGGGATTCG
TCCTCGTCGG ACTATGCGAA GGCCATAGTG GCATTACCCC TTTTGGGCGG GCTGTCTCTG
ATCGTTGGGC TGCTGGCGGG GTGGCTCGTG TATCGCCGCA CCGCCCGCTC GGAATCCGAA
CTCTTCCACG AGAAGGAGCG CGCCCAGGTG ACGCTCCACG CGATCGGGGA TGCGGTGATC
ACGACGGATC TGCGCGGGCA TGTCGAATAC CTCAACCCTG TCGCCGAGCA TTTGACGGGG
TGGACGCATG ACGAGGCGGT CAACCACCGC CTGGACGACG TGTTTATGCT GATCGACGCA
TCCAGTGGCA CCCGCATTTA TCACCCCTTG ACCGAGTGCG TCTACGACGG CATGGCCTCG
GGCCTGCGGC ATGACCAGAT GCTGGTGTCG CGCACCGGCC AGCAGTACGA GATCGAAGAG
GTCGCCTCGC CGATCCGTAA CCGATCCGGT GCCATCATAG GCGCGGCCCT GGTCTTCCGC
GATGTGACGC GCTCACGCTC ATTGGAACGG GATCTGATCT GGGCGGCCCG CCACGATGAG
CTGACCGGCC TTCCCAACCG AGCTGAGTTC GAGCGGCGCC TGCGCAAAAT GGTCATCCAT
GCGCGTCGTA ATGGGATCGA TCACAGCTTG ATCTATCTCG ATCTCGATCA GTTCAAGGTA
GTCAACGATA CCTGCGGACA CCCGGCGGGT GATGAGCTGC TCCGCCAGCT TGCGACGCAG
TTCCAGGAGC GCTTGCGCAG CAGCGACGTG CTTGCCCGAC TGGGGGGAGA TGAGTTCGGG
ATTTTGCTGG AACGCTGCAC ACTTGGAGAG GCGGAGGCGA TCGCGGAAAA GATCCGCGCA
TCCGTGGCCG AGGGCCGCTT CGAGTGGCAG GGCAAGGTCT TTACGGTAGG GGTCTCGATC
GGTGTAGCCC CCATTGACCC CGACACTGGG GATGCCGAGC AGTTTATGAG CAAGGCGGAC
GCCGCGTGCT ACCTCGCCAA GGAGGCGGGG CGCAACCGGA TCCACGTTAC CCATTCGGGG
GACGAAAACG TGGCGTACTG CGAGGATCAC ATGCACTGTG TGCAGGCAAT CAGCGAGGCC
ATCGAGGCCG ATCGTCTGTG GCTCCACGGG CAGAACATCT GCCCGGTGTC GGGGAAGGGG
AAGGGGTACA CCGAGGTCCT GGTGCGCGTT CTGGACCAGA AAGGCGAGCT TCTCTCCCCA
GGCACGTTTA TCCCGGCCGC CGAACGCTTC GGGATCATGC CGCAAATCGA TCGCTGGGTG
ATTCGCCGCG TGCTCACCCA CATGGCGAAC CCCGGAAGCG GGTTCAAGGG CCGCTACTCC
GTCAACCTGT CCGGGCAGTC GCTATGCGAC ATCGAGATGC TCGACTTCAT TACCAAGATC
TTCCGCCACA CACGCGTCGA CCCCTCCCGG ATCTGCTTCG AGATCACCGA GACCGCGGCC
ATTGCCAACC TGGACCAGGC CAGCCGCTTT ATGAAGGAGC TGCGAGGGCT GGGCTGCCGG
TTCGCGCTGG ATGATTTCGG CGTAGGCATG TCCTCGTTTG GCTACCTGCG CGATCTCAAG
GTCGACTACA TCAAGATTGA CGGGAGCTTC GTTCGCGATA TGGCCGAGGA CCCGATTCAC
CATGCAATGG TGGAGAGCAT CCACCATATC GGGCATGTGA TGGGCCTGGA GACGGTTGCC
GAGTTCGTCT CCGACCCGCG CCTTCTGGTG TCACTGCGCG AGATCGGCAT CGACTACGGA
CAGGGCTTTG GCCTGCATCG ACCGGAACCG CTGGAACCGT CCCCGATGGA GGCCAAGCCG
CCGGTCTGGG AACGCCCGGC CGCACTGTAT GCCTCTTGA
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| Protein sequence | MESQTDIASS RTGSTSAIIL GFGFVLFLLL ILIWIGMDRL AHAQSQKQQL VTSNTTLQLL
YEARHAALNR TSYLIQASLS REDADAFEGF AQADHRIDVL HDAYRQLVDS ETAASDEYQA
WQLALADTGF SQGLALERAA LGALPIEELD AFLPRHAELD AFFGELMRRH AEAADSLRDS
SSSDYAKAIV ALPLLGGLSL IVGLLAGWLV YRRTARSESE LFHEKERAQV TLHAIGDAVI
TTDLRGHVEY LNPVAEHLTG WTHDEAVNHR LDDVFMLIDA SSGTRIYHPL TECVYDGMAS
GLRHDQMLVS RTGQQYEIEE VASPIRNRSG AIIGAALVFR DVTRSRSLER DLIWAARHDE
LTGLPNRAEF ERRLRKMVIH ARRNGIDHSL IYLDLDQFKV VNDTCGHPAG DELLRQLATQ
FQERLRSSDV LARLGGDEFG ILLERCTLGE AEAIAEKIRA SVAEGRFEWQ GKVFTVGVSI
GVAPIDPDTG DAEQFMSKAD AACYLAKEAG RNRIHVTHSG DENVAYCEDH MHCVQAISEA
IEADRLWLHG QNICPVSGKG KGYTEVLVRV LDQKGELLSP GTFIPAAERF GIMPQIDRWV
IRRVLTHMAN PGSGFKGRYS VNLSGQSLCD IEMLDFITKI FRHTRVDPSR ICFEITETAA
IANLDQASRF MKELRGLGCR FALDDFGVGM SSFGYLRDLK VDYIKIDGSF VRDMAEDPIH
HAMVESIHHI GHVMGLETVA EFVSDPRLLV SLREIGIDYG QGFGLHRPEP LEPSPMEAKP
PVWERPAALY AS
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