Gene TK90_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2660 
Symbol 
ID8829072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013930 
Strand
Start bp34542 
End bp35159 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID 
ProductUracil-DNA glycosylase superfamily 
Protein accessionYP_003494614 
Protein GI290242944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.405963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.388577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACGT TCGACTGCCA GCGATGCCGT CTGCACGAAA CAGCCGAGCA GGTGGTGAAT 
CCGGACGGGG CTCGGCACTC GATCCTCGCG GTCGGGGAAG GCCCCGGCGC CATCGAGGAT
GACTATGGTG TGGGTTTTGT CGGAACAGCC GGCCAAACCC TTGAGCGCGA GATCCGTGCG
GTCGCAGGGC TCGGCCGCCA GCAGTGGGCG CGGGCGAACA TCGTACGTTG CCGCCCACCG
GATAACCGGA AACCCCGGAC CGATGAAGTG AGCGCCTGCG CCGGCTGGCT GGACGCAGCG
ATTGATGGGA TGGCGCCCCG CGTCATTCTG GCCGTCGGGG AGTCCGCCGG GCGGAAGCTC
GCGAATGCAA GGATCCGGAA GGGCACCGCC TACCTTGGTC AGGTCCACCA ACTGCTATCG
GGGTTGAACC CGGACGCCGG CTTTATCCGT CATCTCCCGC ACTATCGCCA GGTGCCTGTG
GTCCCAATGC CGCATACGAG TGGCCTGGCA TGGAATCGGC GCTACCGCCC CCCGGAGTCA
CCCGGGGACT CGCGCGCAAT CGCCGAACTG GGCCGCGATG CGATTCTTGC GGCATACCAC
ATCCTCCGGG GTCAGTAG
 
Protein sequence
MITFDCQRCR LHETAEQVVN PDGARHSILA VGEGPGAIED DYGVGFVGTA GQTLEREIRA 
VAGLGRQQWA RANIVRCRPP DNRKPRTDEV SACAGWLDAA IDGMAPRVIL AVGESAGRKL
ANARIRKGTA YLGQVHQLLS GLNPDAGFIR HLPHYRQVPV VPMPHTSGLA WNRRYRPPES
PGDSRAIAEL GRDAILAAYH ILRGQ