| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2658 |
|---|
| Symbol | |
|---|
| ID | 8829070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. K90mix |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013930 |
|---|
| Strand | - |
|---|
| Start bp | 32802 |
|---|
| End bp | 34013 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003494612 |
|---|
| Protein GI | 290242942 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.500683 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCC CTCGGGCGCG CTTTTTCGGA GGAAGGCTTC GGTCTTTCTC GAAACCTTCG
GTCAACCGAA ACCGAGCTGC CATTGCGTTA CAGCTCTCCC TGGTGGCCTT GATGGGGGCT
TCGCACTCCC TGTCTGCTGA AAACGCGGGC CACCGCGTTG TGATTTCCGC CGCCTCACAG
CAGGTGGCCT CGTCCTCTAA TCCCTCTCTT CCTTCTGGTT GCGATGAACC TGGGGACACC
TGCGATGACG GCAGTTTCTT TGCAGGAACG CACTCGGACG GGCGGGCGAT CTATGTCGCG
TCTACCATGA CCTTCGGAGC ATGGGGGACG GAAGGCGTAA TCTCGAGCTT TCCGAGGCTT
CCTTCAGTGG CAAACGGGGA TGGCGAGCTT CGGCACAAGA TAATGGGTAT GAGCTGGCGC
ACCCAAAAAA CGCCGGTTCA TTTCTGCGAA GACATGGACG AACATGGGCA TACCGACTGG
TTTCTACCTT CCTCTTCGGA GATCGATAGC TTTGAAATTT CGGCCGCCGA ATTCCGAGAG
CTCATGGATA CTGTTACGCA CATGCGAGCC TGGATCTCCG AACCAATGGA GACGACATAC
GGCCGCATTT GGAGCACCGC GAATAATGGC GAGGTAGATT CACACCGTAA AGGCTCTAAT
GCCCGGACCT TCTGTGTGCG CCACGCCGAG CCGTACGGGG CACATGATGA TCGACTGGAC
CCCGAAAACG CCTCTGTTGG AGACCGTGGT GTTTTCCGAG GTCTCGAGAA ATATCGAGAA
CTGATGTACG CCGGATCAGT CGATGGCCGC CGGATCTTCT ACGCGGCTCG GGGTGGTCCT
GTTCTCCACT ACCACCTTAG CAGGAGTGGC GCGAGCTTCC CGAGTACGTC AAACACAAGC
GCTATACCCG GCATTCACAT TACGGGCAAT GAATGCAGAC TTAAGTTTGG CGGCGGGTGG
CACCACCCCA ACCTTCCCGA GCTTCAGCTT CTGTGGGAAA ACCGTGACCA GCTTCCGGTT
GATTTTGGTG CCTCTTCGGT TTCTCACTAC TGGAGCACCA CAGAGGTTCC GGGCGGTCAT
CGATTCGATG GTGAGGACGC CCTATACGCG TTGGATCTGG AGGATGGGAG CGTTCTGGAA
AGCCGGATCG ATCCTCCGAA TGATTGGGGT GAGCGGCATC GGATCCGCTG CGCCTTCAGC
CCGGACCGGT AA
|
|---|
| Protein sequence | MNRPRARFFG GRLRSFSKPS VNRNRAAIAL QLSLVALMGA SHSLSAENAG HRVVISAASQ
QVASSSNPSL PSGCDEPGDT CDDGSFFAGT HSDGRAIYVA STMTFGAWGT EGVISSFPRL
PSVANGDGEL RHKIMGMSWR TQKTPVHFCE DMDEHGHTDW FLPSSSEIDS FEISAAEFRE
LMDTVTHMRA WISEPMETTY GRIWSTANNG EVDSHRKGSN ARTFCVRHAE PYGAHDDRLD
PENASVGDRG VFRGLEKYRE LMYAGSVDGR RIFYAARGGP VLHYHLSRSG ASFPSTSNTS
AIPGIHITGN ECRLKFGGGW HHPNLPELQL LWENRDQLPV DFGASSVSHY WSTTEVPGGH
RFDGEDALYA LDLEDGSVLE SRIDPPNDWG ERHRIRCAFS PDR
|
|---|
| |