| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2648 |
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| Symbol | |
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| ID | 8829060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013930 |
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| Strand | + |
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| Start bp | 24584 |
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| End bp | 28480 |
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| Gene Length | 3897 bp |
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| Protein Length | 1298 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | YP_003494602 |
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| Protein GI | 290242932 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.472601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCAGA AGGCCCAATC CCCCCAGCTG CTGAAAAAAC CGCTCGCGTT GGCGATCGGC
GTGGTGCTGG CGAGCGCCTA CCTCACCTCT GTATCGGCCG GGGAATCCGG TATCCGGGTG
GTGCTACCCG ACACCAGCGA CAAGGTGGAT ACCGCCGGAA TGACCCCGAC CCCGGGGGAT
CCGGAGGTCT GGAACTCCTA CGCCCACTCC GAAGGCTTTT CGACGGTCGG CGACTACGCC
ACGGATGATG TGGCTTTCAA TAGTGAATCG GCCACCTGCC TGCCGATGGG TCCGGGCTGC
GAAGACTTCA ATGACTACTT CCCCGAGCCG AACCCCGCGG GTGACCTGCG GTTCAACAGC
AACGACCTGG TGAGTACGAC CGGGCTGGAG ACCATCGAGA CGGTGGGGGG TGAACTGAAC
CTCAGTTTTA ATGATCTGAC CGACGTGGAT GGGCTTTCGG GGCTGCGTGA AGTGGGCGGG
ACACTGAACC TGCGGGGCAA CGACCTGACC GACCTGCGGG GACTGGGCAG CCTGCACACG
GTGGGCGGTG CGGTCTTCCT GGACCGAAAC GACCTCCAGA CGCTGGACGG TCTGGAGAAC
CTGGAGGAGA CGGGCAGCAT TTACCTGTAC GGGAACGACC TGACGGATAT CTCGGCCCTG
AGCGGGCTCC GTCGCGCGGG TGGCATCTTC CATCTGTACG ACAACCCCCG CCTGGCTGAC
CTGTCGCCGC TGTCGAACAT CGAAGACGAT GTGGCCTTCC AGGGCTCATT CGGCGGTCAG
GTCCGCATCG ACGCCGGCAT CCATGAGCGC GCGGGCTTCG TGCCGATCCA GGGCGGCGCC
CTGTGCCAGG ACCACAACGC CGATGCGTTC AACGATAGCT ACGCCCAGCA GGCCGAGGTG
TGCGCGGATG ATACGATGGA GGCCTCGGCC ACCTGGAACT CCTACGCCCA CTCCGAAGGC
TTTTCGACGG TCGGCGACTA CGCCACGAAT GATGTGGCTT TCAATAGTGA ATCGGCCACC
TGCCTGCCGA TGGGTCCGGG CTGCGAAGAC TTCAATGACC ACTTCCCCGA GCCGAACCCC
GCGGGTGACC TGCTGTTCAA CAGCAACGAC CTGGTGAGCA CGGCCGGGTT GGAGACCATC
GAGACGGTGG GGGGTGAACT GAACCTCAGT TTTAATGATC TGACCGACGT GGATGGGCTT
TCGGGGCTGC GTGAAGTGGG CGGGACACTG AACCTGCGGG GCAACGACCT GACCGACCTG
CGGGGACTGG GCAGCCTGCA CACGGTGGGC GGTGCGGTCT TCCTGGACCG AAACGACCTC
CAGACGCTGG ACGGTCTGGA GAACCTGGAG GAGACGGGCA GCATTTACCT GTACGGGAAC
GACCTGACGG ATATCTCGGC CCTGAGCGGG CTCCGTCGCG CGGGTGGCAT CTTCCATCTG
TACGACAACC CCCGCCTGGC TGACCTGTCG CCGCTGTCGA ACATCGAAGA CGATGTGGCC
TTCCAGGGCT CATTCGGCGG TCAGGTCCGC ATCGACGCCG GCATCCATGA GCGCGCGGGC
TTCGTGCCGA TCCAGGGCGG CGCCCTGTGC CAGGACCACA ACGCCGATGC GTTCAACGAT
AGCTACGCCC AGCAGGCCGA GGTGTGCGCG GATGATACGA TGGAGGCCTC GGCCACCTGG
AACTCCTACG CCCACTCCGA AGGCTTTTCG ACGGTCGGCG ACTACGCCAC GAATGATGTG
GCTTTCAATA GTGAATCGGC CACCTGCCTG CCGATGGGTC CGGGCTGCGA AGACTTCAAT
GACCACTTCC CCGAGCCGAA CCCCGCGGGT GACCTGCTGT TCAACAGCAA CGACCTGGTG
AGCACGGCCG GGTTGGAGAC CATCGAGACG GTGGGGGGTG AACTGAACCT CAGTTTTAAT
GATCTGACCG ACGTGGATGG GCTTTCGGGG CTGCGTGAAG TGGGCGGGAC ACTGAACCTG
CGGGGCAACG ACCTGACCGA CCTGCGGGGA CTGGGCAGCC TGCACACGGT GGGCGGTGCG
GTCTTCCTGG ACCGAAACGA CCTCCAGACG CTGGACGGTC TGGAGAACCT GGAGGAGACG
GGCAGCATTT ACCTGTACGG GAACGACCTG ACGGATATCT CGGCCCTGAG CGGGCTCCGT
CGCGCGGGTG GCATCTTCCA TCTGTACGAC AACCCCCGCC TGGCTGACCT GTCGCCGCTG
TCGAACATCG AAGACGATGT GGCCTTCCAG GGCTCATTCG GCGGTCAGGT CCGCATCGAC
GCCGGCATCC ATGAGCGCGC GGGCTTCGTG CCGATCCAGG GCGGCGCCCT GTGCCAGGAC
CACAACGCCG ATGCGTTCAA CGATAGCTAC GCCCAGCAGG CCGAGGTGTG CGCGGATGAT
ACGATGGAGG CCTCGGCCAC CTGGAACTCC TACGCCCACT CCGAAGGCTT TTCGACGGTC
GGCGACTACG CCACGAATGA TGTGGCTTTC AATAGTGAAT CGGCCACCTG CCTGCCGATG
GGTCCGGGCT GCGAAGACTT CAATGACCAC TTCCCCGAGC CGAACCCCGC GGGTGACCTG
CTGTTCAACA GCAACGACCT GGTGAGCACG GCCGGGTTGG AGACCATCGA GACGGTGGGG
GGTGAACTGA ACCTCAGTTT TAATGATCTG ACCGACGTGG ATGGGCTTTC GGGGCTGCGT
GAAGTGGGCG GGACACTGAA CCTGCGGGGC AACGACCTGA CCGACCTGCG GGGACTGGGC
AGCCTGCACA CGGTGGGCGG TGCGGTCTTC CTGGACCGAA ACGACCTCCA GACGCTGGAC
GGCCTGGAGA ACCTGGAGGC GACGGGCAGA ATTTACCTGT ACGGGAACGA CCTGACGGAT
ATTTCGGCCC TGAGCGGGCT GCGTCGCACT GGCAACCGCT TCCATCTGTA CGACAACCCC
CGCCTGGCCG ATCTGTCGCC GCTGTCGAAC ATCGAAGACG ATGTGGTCTT CCAGAGCTCA
TTCGGCGGTC GGGTCCGCAT CGACGCCGGA ATCCATGAGC GCGCGGGCTT CGTGCCGATC
CAGGGCGGCG CCCTGTGCCA GGACCACAAC GCCGATGCGT TCAACGATAG CTACGCCCAG
CAGGCCGAGG TGTGCGCGGA TGATACGATG GAGGCCTCGG CCACCTGGAA CTCCTACGCC
CACTCCGAAG GCTTTTCGAC GGTCGGCGAC TACGCCACGA ATGATGTGGC TTTCAATAGT
GAATCGGCCA CCTGCCTGCC GATGGGTCCG GGCTGCGAAG ACTTCAATGA CCACTTCCCC
GAGCCGAACC CCGCGGGTGA CCTGCTGTTC AACAGCAACG ACCTGGTGAG CACGGCCGGG
TTGGAGACCA TCGAGACGGT GGGGGGTGAA CTGAACCTCA GTTTTAATGA TCTGACCGAC
GTGGATGGGC TTTCGGGGCT GCGTGAAGTG GGCGGGACAC TGAACCTGCG GGGCAACGAC
CTGACCGACC TGCGGGGACT GGGCAGCCTG CACACGGTGG GCGGTGCGGT CTTCCTGGAC
CGAAACGACC TCCAGACGCT GGACGGCCTG GAGAACCTGG AGGCGACGGG CAGAATTTAC
CTGTACGGGA ACGACCTGAC GGATATTTCG GCCCTGAGCG GGCTGCGTCG CACTGGCAAC
CGCTTCCATC TGTACGACAA CCCCCGCCTG GCCGATCTGT CGCCGCTGTC GAACATCGAA
GACGATGTGG TCTTCCAGAG CTCATTCGGC GGTCGGGTCC GCATCGACGC CGGAATCCAT
GAGCGCGCGG GCTTCGTGCC GATCCAGGGC GGCGCCCTGT GCCAGGACCA CAACGCCGAT
GCGTTCAACG ATGACTACGC CCAGCAGGCC GAGGTATGCG AGAGCGTTGA GGGGTAG
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| Protein sequence | MHQKAQSPQL LKKPLALAIG VVLASAYLTS VSAGESGIRV VLPDTSDKVD TAGMTPTPGD
PEVWNSYAHS EGFSTVGDYA TDDVAFNSES ATCLPMGPGC EDFNDYFPEP NPAGDLRFNS
NDLVSTTGLE TIETVGGELN LSFNDLTDVD GLSGLREVGG TLNLRGNDLT DLRGLGSLHT
VGGAVFLDRN DLQTLDGLEN LEETGSIYLY GNDLTDISAL SGLRRAGGIF HLYDNPRLAD
LSPLSNIEDD VAFQGSFGGQ VRIDAGIHER AGFVPIQGGA LCQDHNADAF NDSYAQQAEV
CADDTMEASA TWNSYAHSEG FSTVGDYATN DVAFNSESAT CLPMGPGCED FNDHFPEPNP
AGDLLFNSND LVSTAGLETI ETVGGELNLS FNDLTDVDGL SGLREVGGTL NLRGNDLTDL
RGLGSLHTVG GAVFLDRNDL QTLDGLENLE ETGSIYLYGN DLTDISALSG LRRAGGIFHL
YDNPRLADLS PLSNIEDDVA FQGSFGGQVR IDAGIHERAG FVPIQGGALC QDHNADAFND
SYAQQAEVCA DDTMEASATW NSYAHSEGFS TVGDYATNDV AFNSESATCL PMGPGCEDFN
DHFPEPNPAG DLLFNSNDLV STAGLETIET VGGELNLSFN DLTDVDGLSG LREVGGTLNL
RGNDLTDLRG LGSLHTVGGA VFLDRNDLQT LDGLENLEET GSIYLYGNDL TDISALSGLR
RAGGIFHLYD NPRLADLSPL SNIEDDVAFQ GSFGGQVRID AGIHERAGFV PIQGGALCQD
HNADAFNDSY AQQAEVCADD TMEASATWNS YAHSEGFSTV GDYATNDVAF NSESATCLPM
GPGCEDFNDH FPEPNPAGDL LFNSNDLVST AGLETIETVG GELNLSFNDL TDVDGLSGLR
EVGGTLNLRG NDLTDLRGLG SLHTVGGAVF LDRNDLQTLD GLENLEATGR IYLYGNDLTD
ISALSGLRRT GNRFHLYDNP RLADLSPLSN IEDDVVFQSS FGGRVRIDAG IHERAGFVPI
QGGALCQDHN ADAFNDSYAQ QAEVCADDTM EASATWNSYA HSEGFSTVGD YATNDVAFNS
ESATCLPMGP GCEDFNDHFP EPNPAGDLLF NSNDLVSTAG LETIETVGGE LNLSFNDLTD
VDGLSGLREV GGTLNLRGND LTDLRGLGSL HTVGGAVFLD RNDLQTLDGL ENLEATGRIY
LYGNDLTDIS ALSGLRRTGN RFHLYDNPRL ADLSPLSNIE DDVVFQSSFG GRVRIDAGIH
ERAGFVPIQG GALCQDHNAD AFNDDYAQQA EVCESVEG
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