Gene TK90_2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTK90_2646 
Symbol 
ID8829058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. K90mix 
KingdomBacteria 
Replicon accessionNC_013930 
Strand
Start bp22379 
End bp23206 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content57% 
IMG OID 
Productlipoprotein 
Protein accessionYP_003494600 
Protein GI290242930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.46452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTACCCG AAACCGCCGG CTACACCAGC GCAGGGTCGG GGGCGAATGG GGCTCCGGAA 
GCCGCCGCAG AGGATTGCTA CGACCCCGAC AATATCGGCC AGGTCGGGGA ATGGTCGGGT
TGTGAGGGCA TGCTTATCGT GGATGACCAC ATGCTGCGCG AAGCCGCCAG TAACGCGATC
GGGATCAGGG GAGACGACTC CTTCAATGTC GCCCCAGGCG ATGCCTATGC GCCGGAGAAC
CTGACGGAGA CCTTTACGTT CGAGCAGGAC GGCCGGGATG TCTTCACCGG TCAGGTTGTC
AATATGTCCA GTCTATTCCG TGATTCTGAC ATGGATCTGG ATATTGGCTA CTGGGACACC
TCCCGCGTTG AGAGTATGAG CCACATGTTC CGGGGTACTA CGATGTTCAA TCAGGACATC
GGGAGCTGGA ACGTGACCAG TGTCATCACC ATGGAACGGA TGTTTGATAG CGCAGAAGCA
TTCAATCAGG ATATTGGTGG CTGGGATATG TCCAATGTCC GGGTGCTGTC CTCGATGTTC
CGTTACTCCG GTAGCGTGTT CAATCAGGAC ATCGGCGGAT GGGACACTTC GAACGTCGAA
GCCTTCAATC ATATGTTCCA GCGCAACAAC GCATTCAATC AAGATATTGG CGGGTGGGAT
GTCTCGAGCG CGCGCGATGA TTCGGACTTC GCGCGCATGT TTGAGAATAC CGACGCATTC
GACCAGAATC TCTCGTGCTG GGATGTGGAG CACATCGAGG AGGTGCCAAC GGTCTTTGGC
GTCGGTGTGG ACGACAGGCC TCGGTGGGGT GAGTCTCCGC CGTGCTGA
 
Protein sequence
MLPETAGYTS AGSGANGAPE AAAEDCYDPD NIGQVGEWSG CEGMLIVDDH MLREAASNAI 
GIRGDDSFNV APGDAYAPEN LTETFTFEQD GRDVFTGQVV NMSSLFRDSD MDLDIGYWDT
SRVESMSHMF RGTTMFNQDI GSWNVTSVIT MERMFDSAEA FNQDIGGWDM SNVRVLSSMF
RYSGSVFNQD IGGWDTSNVE AFNHMFQRNN AFNQDIGGWD VSSARDDSDF ARMFENTDAF
DQNLSCWDVE HIEEVPTVFG VGVDDRPRWG ESPPC