Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TK90_2616 |
Symbol | |
ID | 8829028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. K90mix |
Kingdom | Bacteria |
Replicon accession | NC_013930 |
Strand | + |
Start bp | 8178 |
End bp | 8615 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | WD40 repeat, subgroup |
Protein accession | YP_003494570 |
Protein GI | 290242900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.173979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.948356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCA ATTACCGTAC TCCCCTGAAC GCCCTGGCGG CCGCCGGCAT GGCGCTGACC CTGGGCGGGG CCGCCTTCGC CGAAAGTGCC AACTACCGCG TCATCCTTCC CGACACCGCG AGTTTCGTGG CGACCGGTGG GGGTGGTAAA GAAGATCTCT GTGATGGGAC GAGCGTCGAG GAGGTCTGGA AGTTCGAGGG GCATTCCAGC AGCGTCTACG GCGTCGCCGT CGACGGCGCC GGGAATGTGT ACTCCGGGAG CCGTGACAAC ACCGTCCGCA AGATCGACCC GGACGGGAGC GAGGTCTGGA GCTTTACCGG GCATTCCGAT CGGGTCTACG GCGTCGCCGT CGACGGCGCC GGGAATGTGT ACTCCGGGAG TCTTGACAAC ACCGTCCGCA AGATCCGCCA GACCAGTGAC ACGTGCACAT CGGGCTAG
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Protein sequence | MTINYRTPLN ALAAAGMALT LGGAAFAESA NYRVILPDTA SFVATGGGGK EDLCDGTSVE EVWKFEGHSS SVYGVAVDGA GNVYSGSRDN TVRKIDPDGS EVWSFTGHSD RVYGVAVDGA GNVYSGSLDN TVRKIRQTSD TCTSG
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