| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1550 |
|---|
| Symbol | |
|---|
| ID | 8828521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 1485537 |
|---|
| End bp | 1486754 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | |
|---|
| Product | GTP-binding proten HflX |
|---|
| Protein accession | YP_003483918 |
|---|
| Protein GI | 289597222 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.990824 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGATG TCATTGTAGT TTTTGATGGA AACGAGGAAT TTGAGGAGCT TGTGAAATCC
TTAGGATACG AAATAGTGGC AAAGGTTTAC TTCAAAAATA AGGTAAATCC AAAGTACTAC
ATCTCCAAGG GCAAGATAGA GGAAATTAAA AATCTTCTTA AAGATTTCAA TGTTGAGAAG
ATTATAATAG ATGCCATTTT GAAATCCTCT CAATGGTATA AGCTTGAGAA GGAATTGAAA
ATTAGGGTTG ATGATAGAAT AAAATTGATC ATAGATATAT TTGCAGATAG GGCGAGAAGC
AGAGAAGCGA TGATGCAAGT GGAATATGCA AATTTGAAAT ACGAAACATC ACATATTAAA
GAACTCATCC ACCAAATCCG TTTAGGAGAG CACCCCGGAT TTATGGGTGG GGGAGAGTAT
GAAATTGCTG ATTATTATGA GCAGATAAGG AGAAAAATGG CTAGAATAAG AAAAGAACTG
GAAAAATTGA AGGTGCATAG AGAAGAGAGA AGAAAGAGGA GAAAGGAAGA GGGGTATATC
CTCGTGGGAA TTGCAGGGTA TACAAACACT GGAAAAAGTA CCCTGCTAAA AGCCCTAAGC
GGTAGAGATG TGGTCATAGA GAACAGAATG TTCTCCACAT TGAGCACCAG AACTTCAAAG
ATAGGTAAGG AAAAAATCCT TATAACAGAC ACTGTAGGAT TCGTTGAAAA CATGCCCCCT
TGGTTAATAA GGGCATTCGA GCCGACATTG GAGGAAATTT ACAAGGCAGA TATTGTGCTT
TTGCTTCTTA ATTGCCAAGA ATCAATCGAA GATTTTAAAA GAAAAATGCA GGTAAGCTTA
GAGATCTTGG AAGGAAAGAG TGAGGGAAAA ATCATACCTG TAATAAACAA AATTGATTCC
TGTAAAGACC TCGATGAGAA AATTAAAATT GCAAAGGAGA TTGGAGAGCC AATTGCAATA
TCTGCTCTAA GGGGCATAGG AATCGAGGAT GTTATAAGGA GAATAAAAGA TGAGATGAAA
ATAGAGAAAT TCTACGCAGA AGTGGAAAAA GACAGCAAAG CATACAATTT CATAATAAAA
CACGGAAAAA TAATAAAAAT TGAAGCAGAT GAAATGATGA AAATTATATT TGAAATGCCT
ATATCCAAAT ACTCTGCGTT GAAAGATTTA ATTCGAGAGA TTTCCACAGG AAATGATGGG
GTGTTAAAGA GGATATAA
|
|---|
| Protein sequence | MPDVIVVFDG NEEFEELVKS LGYEIVAKVY FKNKVNPKYY ISKGKIEEIK NLLKDFNVEK
IIIDAILKSS QWYKLEKELK IRVDDRIKLI IDIFADRARS REAMMQVEYA NLKYETSHIK
ELIHQIRLGE HPGFMGGGEY EIADYYEQIR RKMARIRKEL EKLKVHREER RKRRKEEGYI
LVGIAGYTNT GKSTLLKALS GRDVVIENRM FSTLSTRTSK IGKEKILITD TVGFVENMPP
WLIRAFEPTL EEIYKADIVL LLLNCQESIE DFKRKMQVSL EILEGKSEGK IIPVINKIDS
CKDLDEKIKI AKEIGEPIAI SALRGIGIED VIRRIKDEMK IEKFYAEVEK DSKAYNFIIK
HGKIIKIEAD EMMKIIFEMP ISKYSALKDL IREISTGNDG VLKRI
|
|---|
| |