Gene Aboo_1546 details

Gene Information

• Locus tag: Aboo_1546
• ID: 8828517
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 1478273
• End bp: 1481716
• Gene Length: 3444 bp
• Protein Length: 1147 aa
• Translation table: 11
• GC content: 35%
• Product: Protein of unknown function DUF835
• Protein accession: YP_003483914
• Protein GI: 289597218

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.933731
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCTTTG TCGGCAGGGA GAAAGAACTC CACAATCTAA AGATGTATCT TAATGAGGTT 
AAGAGAGGCA AGGGTAAAGT TATACTTCTG GAAGGTCCTG CCGGTATAGG AAAGAGTTAT 
CTTATTGATA AATTTTTGGA AGATAATAAG GATGTTCAAA TTCTCAAAAC TAGGTGTGAG 
CAATCAACCC AGTATGTACC CTATAATGCC ATATCTCAAG CCCTTGGTAG TTTTGGGACC 
TTGAGCGAGA TAAAGAGAAA GGAATGGAAG AGAAAGATAA GAGATATATC AAAAAAATTG 
TATAAAGAGA ATAAGATGGT ATTTGTAGAT GAAATAGGAT ACGGAGGAGG ATATAGATTA 
TATAAAGAAC TCAGCAAGAG AATGAAAGGA TTGTATTTCA CAATAAGGCA ACCAAGCCGA 
AGTGATGCCA TATGGCTTAC AGAGACGAAA ACGGATAAAG AGAGCATAAA TCCGTATAAT 
CTCGAGTTTG AGTTCGTAAT GTATTTACAC GAATTTTTAA ACAGTAGTGA GAGAAAATTG 
GTTTACATAG AAGATTTGAA CTTTTTAGTT TATATTGCAG GGATAGATAG GGTTGTGGAT 
TTTCTTCACA CTTTGCGCTC TTTAGCTTCT AATAGGCATT TAATTATAAT CTCCGGAAAA 
ATAGAGTACC TCTCTGAGAA GGAGAGGCAT CTGCTAAGCC TGTTTGATGA AAAAATATTA 
ATTGAATGGG AGGATAAAAT AACGCCCCCT ACCATAATTC TTACTGATAG GGTCAGAGAA 
AAAAATGTTT TAAGATTAAC AAATAAAAAA GATGGAGGAA ACACTCTTTA TGTATCCCCA 
CAAGGCATCC ACCCTACCCG TTTGGATTTT GAAATATTTG AGAAAATTGC GGAGGCAATA 
GATAATGGGA TGGATATTGC AATAGAATGT CTTAACACCA TAGTCCATTA TAATGATAAG 
AGAAGGGTTT ATATATGGCT AAAGGCGGTT AGAGATTACG CTAGAAAAAA TGGAAGGAGG 
GTGTATTTAG TTGAGAGGAC ACCCATCTCT AAAGATATAG AGTTCTTCTT TGATTTGATA 
GATGAAGGTA AGGATAGAAT ATATGGGGGG ATGGATATAG TAGAGGGCCC TGTAAAGTTT 
TATGATGTTA TCCACAATTT CTTAGATTAC AACTCTAGGA GAAAGCCTAT GATTTTGGTA 
TTTGAGGATA TCCAATGGAT AGATAGTAAT TCTTTAGAAC TTATATATTA TCTTGCTAGG 
AATATAGGAA AAGGCAGGAT AATGATAATC CTCACTTATA GAAATGAGGA TATTGTTGAA 
AATAAGAATC TTCTGGAGAT TCTCACAAAT ATCCAAGATG AGCCCACCGC TAAGGTATTA 
AGATTAAAGC CTTTAAAAGA GAAGGATATT GAGGATATAC TTTATGGCAT GGGATACAGA 
GGTGATGTTG GATCCATTTA TGAGATTAGT GAGGGAAATC CTCTACTGGC AATAAATATG 
GCAAAATACA TAATGCAAGG AAACAAAAGT TCACTGCCGG AGACGATAAG AGAGAGTGTG 
GAGCTGCAAG TAGATAAGCT TAAAGAGCAT GTCTTGAGTT TTATTAGGTT TTTATCTGTG 
GTTGGATACG AAATCCCTTT GAGTATTGTA GAATCTTTTT ATCCTGAGCA TAAGCAATTC 
TTGGAGGATC CTTCCAACAT ATTTGTAATA TTGGAAAATA AAAAACTAAG ATTTATTTAC 
CCCATCTACA GGGAAATAAT ATACAAGGGT ATATCTCGTG ATACAAGAAT TAATTTTCAT 
AGGAAAATTG GGAACTGGGC AGAAAGAAAT AACGATCTTT TTATGGCAGC TTATCATTAT 
TATATGGCCA GAGACGAGCG AGCAGTCGGA TTTTTAAGAA TCGCTGCAGA AGAATCCGCT 
AAAATGATGG CTTTCAAGAG CGCCATAGAT TATCTCCAAA AGGCTCTTGA AATAGCGGAG 
AAATATGGAA AAGTTGAGCT CATAGGAGAA TTGTACAGGG ATCTTGGAGA GTGGTATGTT 
TCTGTGGGGG AATACAAAAA AGCAGCAGCG ATGTTTTCTA GGGCTACAGA GTATCTACCT 
GAAGATATTG TGTATTTTGG CACTCAAATG GGGATGTGCT ATAGGTTGAT GGGTGAGCTA 
AATAGGGCTA AAGAAATTTT AAACGAGTAC CTTAAGATTG CAAAGGGTAT GGATAAGGGG 
AGAATAATTG GAGAACTTGG CATAATAGAG TGGGAAACTG GGGATTTTAA GGAATCCCTT 
GAGAAATTAG GAAAATATCT CGCTTATGCT CAAAGATATG AAAGCAAGAT TGATGAAGTT 
AAGGCTACGA GAAATATAGC TTCCGTATAT TATATGGAGG GAAATTACAA AAAAGCACTG 
AAGTATGCGG AGAAAGCTCT TAGGCTTGCA GAGGAGAGCG GAGACATAAG GGAGATAGCC 
GATACTTATA ATGTCATAGG TGTGATAAAT AACCATCTAA ATAATTACGA GGAGGCATTA 
ACTTATCTCT TAAAGTATCT TGAGATCAGC GAGAAGATGG GAAATTTAAC ATATCTATCA 
AGAGCCTATA ACAATATAGG AGTAACTTAT GAGAAAATGG GTGATTTAAA AAAAGCTGAA 
GAATATCACA AAAGGGCTAT AGAGATAATT GAAAAGCTTG GCAACGATAG ATTGTTGGAG 
GCATTTCATA ATAATATAGC AGTTCTCTAT TCAAGACATG GAAATTACTC TCTCGCTTTA 
GAACATATAA GTAAAAGCTT AGAAATATCA ATTAAATTAA ATAACAAGTA TGGTATATGC 
GAGAGATTGG TATCTCTGGG AGAGATAAAT GAGGAGATGG GTAAGTATAT GGACGCCATT 
GACTTTTATT CACGAGCTAT GGAAATTGCA AAGATGTATT CCTATACTAC AATTCTATTC 
TCCATATACC TTTATATGGC AAGGGCTTAT GTGCATTTAG AGGAATTTAA AAAAGCGCAG 
AAGTATATCG AGTTAAGTCA TTCTCTGAAA AAGAATGTAC AGGAGAGTTA TTTGATAATG 
GATTATTATC TAGTTAATGC AGAATATGAT ATCGCTTTGG GCAACTGGGA TATGGTATTA 
AAATGGCTGG ATAAAGCCAA GGAGAATGCC AAGAAAATAA ATGATGTGAT CAACTCAATA 
TATATAGAGG TGCTCAAGGC TTATTCTATA TGTCAGAGAG ATGATAAATT TTCAAAAGAT 
GTATTTGAAA GTGCCATAAA GGAGTACGGT GAGATGGATT ACAAAATCTA TTTGGCTAAG 
ACATATTACT ATTACGGACT GTGTCTCTTA AAGAAGAATA AAAAAGAATG GAAAAACAAG 
ATAAATAAAG CTATAGAGCT TTATGAAGAG ATGGGTTTGG AAGATAAACT GCGAGAAGTT 
AAAAAGAAAA TCAGTGGGAT ATAA 

 

Protein sequence

MLFVGREKEL HNLKMYLNEV KRGKGKVILL EGPAGIGKSY LIDKFLEDNK DVQILKTRCE 
QSTQYVPYNA ISQALGSFGT LSEIKRKEWK RKIRDISKKL YKENKMVFVD EIGYGGGYRL 
YKELSKRMKG LYFTIRQPSR SDAIWLTETK TDKESINPYN LEFEFVMYLH EFLNSSERKL 
VYIEDLNFLV YIAGIDRVVD FLHTLRSLAS NRHLIIISGK IEYLSEKERH LLSLFDEKIL 
IEWEDKITPP TIILTDRVRE KNVLRLTNKK DGGNTLYVSP QGIHPTRLDF EIFEKIAEAI 
DNGMDIAIEC LNTIVHYNDK RRVYIWLKAV RDYARKNGRR VYLVERTPIS KDIEFFFDLI 
DEGKDRIYGG MDIVEGPVKF YDVIHNFLDY NSRRKPMILV FEDIQWIDSN SLELIYYLAR 
NIGKGRIMII LTYRNEDIVE NKNLLEILTN IQDEPTAKVL RLKPLKEKDI EDILYGMGYR 
GDVGSIYEIS EGNPLLAINM AKYIMQGNKS SLPETIRESV ELQVDKLKEH VLSFIRFLSV 
VGYEIPLSIV ESFYPEHKQF LEDPSNIFVI LENKKLRFIY PIYREIIYKG ISRDTRINFH 
RKIGNWAERN NDLFMAAYHY YMARDERAVG FLRIAAEESA KMMAFKSAID YLQKALEIAE 
KYGKVELIGE LYRDLGEWYV SVGEYKKAAA MFSRATEYLP EDIVYFGTQM GMCYRLMGEL 
NRAKEILNEY LKIAKGMDKG RIIGELGIIE WETGDFKESL EKLGKYLAYA QRYESKIDEV 
KATRNIASVY YMEGNYKKAL KYAEKALRLA EESGDIREIA DTYNVIGVIN NHLNNYEEAL 
TYLLKYLEIS EKMGNLTYLS RAYNNIGVTY EKMGDLKKAE EYHKRAIEII EKLGNDRLLE 
AFHNNIAVLY SRHGNYSLAL EHISKSLEIS IKLNNKYGIC ERLVSLGEIN EEMGKYMDAI 
DFYSRAMEIA KMYSYTTILF SIYLYMARAY VHLEEFKKAQ KYIELSHSLK KNVQESYLIM 
DYYLVNAEYD IALGNWDMVL KWLDKAKENA KKINDVINSI YIEVLKAYSI CQRDDKFSKD 
VFESAIKEYG EMDYKIYLAK TYYYYGLCLL KKNKKEWKNK INKAIELYEE MGLEDKLREV 
KKKISGI