Gene Aboo_1545 details

Gene Information

• Locus tag: Aboo_1545
• ID: 8828516
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1477576
• End bp: 1478286
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 37%
• Product: putative circadian clock protein, KaiC
• Protein accession: YP_003483913
• Protein GI: 289597217

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.056031
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGTTTA TAAACACCTA TGTTAAGGGG CTTGATGAGC GAATAGAAGG TGGAATCCCG 
AAGGGCTCTG TAATTTTAAT TTCTGGGCCT ACTGGCAGTA TGAAGTCCAG CTTCAGTTTC 
TACATTGCCT ACAATTATCT AAAGGACAAA AAAGAGGGAA ATGTTGTGTA CATTTCCTTA 
GAACAGAGCA GGGAGAGTTT GATAAATCAA ATGGTAAATT TGGGAATGGA TATAGATAAA 
CTGCCAAAAA ATTGCGAATT CAATATATTT GATTGGGGAT TGGTTAGAAA GATAGTAAAA 
GATGCAGGAA AGCATGAAAA GGTGAACTGG CTAGATACTA TAATAAATCC AGTTAAAGAG 
TTTGCAAAGA ACAAAAAATT GGATTTCGTG ATTTTGGACT CGCTTAACGC CCTTTATGCT 
ATCTCTAACT TGGAGAATCC AAGAAACCAA TTATTCTTCC TCTTTGAAGC CATGAGAGAA 
TTAGGTGCCA CAACCCTGGC CATATCAGAA ACAACTTACA ACTCTATGCA ATTTGGAACT 
TACGATGTTG AAGGCTTTTT GGCTGATAGC ATAATCCATC TTTCTATGGA AAGGATAGGA 
AGAACATTAG GGAGGTACAT ATCAATAATA AAAATAAGGG GAGTTAAACA CTCTACAGAT 
TACTATCCGC TCTTGGTAGA TAAGAAGGGA TTTAGAATTA TATCCCACTG A 

 

Protein sequence

MEFINTYVKG LDERIEGGIP KGSVILISGP TGSMKSSFSF YIAYNYLKDK KEGNVVYISL 
EQSRESLINQ MVNLGMDIDK LPKNCEFNIF DWGLVRKIVK DAGKHEKVNW LDTIINPVKE 
FAKNKKLDFV ILDSLNALYA ISNLENPRNQ LFFLFEAMRE LGATTLAISE TTYNSMQFGT 
YDVEGFLADS IIHLSMERIG RTLGRYISII KIRGVKHSTD YYPLLVDKKG FRIISH