Gene Aboo_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1539 
Symbol 
ID8828510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1471742 
End bp1472938 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content43% 
IMG OID 
Productsodium/hydrogen exchanger 
Protein accessionYP_003483907 
Protein GI289597211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0928193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCTTA GTTCAGTAAC GAATGGCCCA GGCGCAATAT ACTTGATCGT GGGGCTTTTG 
ATGATACTTG GGTTATTTTT TGGTTATCTT TTTAGGAGGG TTCACCTCAC TGATGTCCTT
GCATACTTAT TTGCTGGTTT ACTCTTAACC ATTTTAGGAT TCAAAGCATC CACAACATTT
TTCAATATCG TTACAGGAGC AACTTTGTCC TTTGTAGGAT ATATCGTGGG ATTGAGTTTC
TCTAGAAAAT TTCTTAAGAG AATGGGAAGA AAGGTGATGA TCATACTCGT GGTTGAGGTC
ATCGTTACTT CACTATCCGT TATGCTATTT GTATATGCAT TCACAAGAGA TTTGGCATTG
GCAGTGCTTC TTGGCTCGTT AGCACCAGCA ACAGCTCCTG CAGGCACAAT TGCCGTTTTC
CGTTCACTAT CCTCCCATGG AATATTGACC GATGTAGCCA CTGCCGTTGT TGGCTTGGAT
GATGCTGCCG GGATAATAAT GTATGTTGTT GGCATAATTT GGACAAAGGG GTTATTAGGA
TATCATGTTA CTATCGGAAC AGCAGTGATT CACGCTCTAT GGGAGATATT TGGAGCCTTT
ATGCTAGGTG GAATTCTTGG CTTCCTATTT GGATATGTGG GAAAGAAAAA ATCATTCACT
CCAGAACAGA ATCTAATTTT AGGAACCGCA GTGGCACTCC TTGGATGGGG CTTAGCTTCC
GTGATTGGAG TATCCAATAT TCTTACTGCT ATGGCAATAG GCATGACTGT GGTAAATATG
AACGAACAGC TTGGAATAAG CAGTTACAAG GCTATTGATG CAATAATGAC ACCTATCTAC
ATACTCTTCT TCGGAGCTAT AGGTATGGAG ATAAATTTCA CCTTGCTAGC TGCCACTTGG
GCCGTTGCCA TAGTATATTG CATAGGTAGA ACCGTTGGGA AAGTAATAGG TTGTAGCTTT
GGCTCATGGA TTGCCAGAGC GGAGGATAAA CTTAAAAAAT ATTTAGGTAT AGCCCTATTG
AACCAAGCTG GTGTGGCTGT AGGATTGGCA GCACATGCAG CTCAAGAGCT TGGGGGCACA
TACTTGGGCG CCATAGTAAT AACGCAAATT GCAGTTACAA CTGCCATATT CCAGATAGCA
TCTCCATTGG GCACTCAGTT CGCCGTGAAG AAGGCGGGGG AGGCAATGAA TATATAG
 
Protein sequence
MWLSSVTNGP GAIYLIVGLL MILGLFFGYL FRRVHLTDVL AYLFAGLLLT ILGFKASTTF 
FNIVTGATLS FVGYIVGLSF SRKFLKRMGR KVMIILVVEV IVTSLSVMLF VYAFTRDLAL
AVLLGSLAPA TAPAGTIAVF RSLSSHGILT DVATAVVGLD DAAGIIMYVV GIIWTKGLLG
YHVTIGTAVI HALWEIFGAF MLGGILGFLF GYVGKKKSFT PEQNLILGTA VALLGWGLAS
VIGVSNILTA MAIGMTVVNM NEQLGISSYK AIDAIMTPIY ILFFGAIGME INFTLLAATW
AVAIVYCIGR TVGKVIGCSF GSWIARAEDK LKKYLGIALL NQAGVAVGLA AHAAQELGGT
YLGAIVITQI AVTTAIFQIA SPLGTQFAVK KAGEAMNI