Gene Aboo_1535 details

Gene Information

• Locus tag: Aboo_1535
• ID: 8828506
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1467826
• End bp: 1468536
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 38%
• Product: transcriptional regulator, TrmB
• Protein accession: YP_003483903
• Protein GI: 289597207

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACATGG ATTCCGCTAT TGAAGAGTAT AAAAAAATTG TAGATAGCCT TGAAAAATTG 
GGATTATCCC AGTATGAAAT CAAGGCATTT CTTGCATTGA TAATGCTCGG TGTAGGCTCT 
GCTGAGATCA TTGCAAAAAA CGCAAAGATT CCAAGAACTT CTGCATACAA GGTTCTTGAT 
TCCCTGGAGG AAAAGGGATT CATCATATCC TCAGAAGGGA GACCAAAGAT GTACAAGCCA 
GAAAACCTTC AAACTTTGAA AAATAGAATA ATAGAAGAAA TAGAAGAACT ATTCGAAAAA 
CTGCAATTTG TAGAAAGCAT ATTTATGGAG AAGGGCGAGC CACAACTTGT GTACACAGTA 
TATGGCAAAG AGAAGGTTAT GAAAAAAATC GCAGAGATGA TTGATTTATC CGAGGAAGAG 
ATAATAATAT CCACGCCAAA AATATCAGAG CTTAGAAAAT CTGTGGAAAA GAATATTGAA 
AGGGCGCTTA AGAGAGGAGT AAGAATAATA GTTGTAACGC ATCCAAATCA AAGAGTGCCT 
CCAGGAGTGA TTGCATATAG AAAAAAAGGG CTTATGGCCA CGGATATAGT GTGTGATAAT 
AAAAGCGCCT TACTTGCATC TCCCGAGCTA AACGCATGCG GATACACGGA TAATCCCGCA 
TTAGCACAGC ATTTAACACA TTTCATAAAC ATACTCATTG AGAAGGAATA A 

 

Protein sequence

MDMDSAIEEY KKIVDSLEKL GLSQYEIKAF LALIMLGVGS AEIIAKNAKI PRTSAYKVLD 
SLEEKGFIIS SEGRPKMYKP ENLQTLKNRI IEEIEELFEK LQFVESIFME KGEPQLVYTV 
YGKEKVMKKI AEMIDLSEEE IIISTPKISE LRKSVEKNIE RALKRGVRII VVTHPNQRVP 
PGVIAYRKKG LMATDIVCDN KSALLASPEL NACGYTDNPA LAQHLTHFIN ILIEKE