Gene Aboo_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1520 
Symbol 
ID8828489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1454739 
End bp1455503 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content44% 
IMG OID 
Product50S ribosomal protein L4P 
Protein accessionYP_003483888 
Protein GI289597192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000105309 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGTTA ATGTTTACAC AGTTGATGGT GAGGTAAAGA GACAAATAAC CCTTCCAAAA 
GTTTTCAATT ATCCATATAG GCCAGATTTA ATAAAAGAGG CAGTTAGGAT ATTTCAGCTT
AATAGGGTCC AACCTCATGG TGTGAGTCCA ACAGCAGGTA TGCGCCGTGT TGCTGAATCT
TGGGGTCCAG GGCATGGCAT ATCGAAGATG GTGCCCCGTG TTGGGCATAC TTCAAGGGGT
GCCATAATTC CAAGTACCGT TGGTGGCAGA GCTGGACATC CACCGACAAC CCAAAAAGTT
TGGAAGAGAA AGATGAACAT AAAGATGCGC CGCTTAGCAA AATATTCTGC ATTATCAATG
ACCTCAAATA AGGTTATGGT TGCCAAAAGG GGCCACAAAT TCTCTCCCGA TATAACCTTG
CCCGTTGTGG TTGAGGATGA GTTTGAGAAC ATCTCCACTG TGAAAGAAGC CATTAGGGTA
TTGCAGAATT TGGGTATTTA TGAGGATATT ATAAGAGCAA GCGAGAAACG CATCCGTGGA
GGAAAGGGCA AGAGAAGAGG TAGAAGGTAC AAGAAAAAGA AGAGCGTTTT GATAGTTGTA
TCCAACAAGG ATAATGTTCT GAAGGGTTTC AGGAATCTGC CTGGAGTGGA TATTGTTACT
CCTCGTGAGT TAAATGCAGA AGTTCTCGCT CCCGGAACTC ATGCAGGTCG CTTGGCAATT
TTCACGGAAA GTGCTATAAA GGAGATCAGG AGGTGGGCTA AATGA
 
Protein sequence
MRVNVYTVDG EVKRQITLPK VFNYPYRPDL IKEAVRIFQL NRVQPHGVSP TAGMRRVAES 
WGPGHGISKM VPRVGHTSRG AIIPSTVGGR AGHPPTTQKV WKRKMNIKMR RLAKYSALSM
TSNKVMVAKR GHKFSPDITL PVVVEDEFEN ISTVKEAIRV LQNLGIYEDI IRASEKRIRG
GKGKRRGRRY KKKKSVLIVV SNKDNVLKGF RNLPGVDIVT PRELNAEVLA PGTHAGRLAI
FTESAIKEIR RWAK