Gene Aboo_1509 details

Gene Information

• Locus tag: Aboo_1509
• ID: 8828478
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 1449806
• End bp: 1450516
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 43%
• Product: Ribosomal protein S4E, central domain protein
• Protein accession: YP_003483877
• Protein GI: 289597181

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 7.86693e-16
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGATC ATGTTAAGAG ACTTGCAGCT CCACGAACCT GGCCAATAGC AAGGAAAAAA 
TACCCATTTG CTCCAAAGGT ATCTCCGGGT CCGCATGGAG CTCACGAGTC CATACCCTTA 
CTTGTGGTAT TAAGAGAGAT ACTGGGCATT GCCAGCAACA AGAGAGAGGC CAAGAAGATA 
TTGAATTCCA GAAAGGTTAA GGTAGATGGT AGGGTAGTAA GGGATGTTAA GTTTCCAATA 
GGATTTATGG ATGTTATAAG CATAGGGGAT ATCAACAAGC ACTACAGAGC GGTTTATGAT 
GTTAATGGTA ATATGCGTAT AGTTGAGATT CCTGAGGATC ATGCAGAATG GAAGTTGGTT 
AGAATCGAGA ACAAGAGCGT GGTGCCTGGA GGTAAGATTC AGCTCAACCT TCACGATGGA 
AGGAACATAT TGCTTGACGA GAATAAATAT AAAACTGGAG ATGTTCTCAA GATAAAACTG 
CCCACACAGG AAATTTTGAG CCATTATCCC CTAGCTGAGG GAAGTGTTGC CATAGTTACC 
GGTGGAACCC ATAGAGGAAG GGTGGCACAC ATAAAAGAGT ATGTGGTTGT AAGAAGCCCA 
CAGGATAATA TGGTTAGATT TGAAGAGGGA TTTGAGATTC CAAAGCGCTA TGTATTCGTT 
ATAGGCGTTG GAAAGCCGGA AATCACGATA CCTGAGGTGA GCGCCTTATG A 

 

Protein sequence

MSDHVKRLAA PRTWPIARKK YPFAPKVSPG PHGAHESIPL LVVLREILGI ASNKREAKKI 
LNSRKVKVDG RVVRDVKFPI GFMDVISIGD INKHYRAVYD VNGNMRIVEI PEDHAEWKLV 
RIENKSVVPG GKIQLNLHDG RNILLDENKY KTGDVLKIKL PTQEILSHYP LAEGSVAIVT 
GGTHRGRVAH IKEYVVVRSP QDNMVRFEEG FEIPKRYVFV IGVGKPEITI PEVSAL