Gene Aboo_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1496 
Symbol 
ID8828465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1442244 
End bp1442915 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content38% 
IMG OID 
Productprotein of unknown function DUF106 transmembrane 
Protein accessionYP_003483864 
Protein GI289597168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.939941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAG AGGTGCCCTC AGCAGTTCCT AGACAATCAA GTATGAGCAG TTTGTATATG 
ATGATAACTC TCCTTATGTT TATGGTATTG TTTATCCCAA GTCTCAGGGA AGCATTGGGC
ATGGCGGCAG GAGTTATTTT AGAGCCTCTC TTTGCTTTTA ATTATAATTA TCCGCTTTAT
ACCTTTCTTG CCACAGGGCT CTTAGTGACT CTAATTAATA CTTGGGCAAG ACACCATTAT
ACTGATTGGA TAAGTATGGC TAGAATGCAA GCGAAGATGA AAGCTTTTAA CAAGGTATAC
AGAGAGGCAG TGAGAAAGCA AGATGTGAAT CAAATAGAAA AACTCAAAAA GATCCAGACA
AAGAATATGG CAGAGAATAT GCAGATACAG AGCAACAGTA TGAAAGCCAC CATGTTTACT
ATGTTCATTG TTATATCCAT CTTTACATGG CTTTGGATAT TTCTCCAAAC AAAGGCACAT
TATACCCTTG TAGCCATACC TTGGAGCAAT GTAATTGAGC TTAATAGAGT TCAGTACTTG
TTTCCAAATT GGCTCCTGAT ATATTCTGCC TTTACTATGC CACTCAGCTG GGTGGTTACA
TATATATTTA AGTATATGGA GTTCCGAAAA AAGGTTAAAG AACTCCCAGC TGAGATTGAG
GCGGTAGAAT GA
 
Protein sequence
MTEEVPSAVP RQSSMSSLYM MITLLMFMVL FIPSLREALG MAAGVILEPL FAFNYNYPLY 
TFLATGLLVT LINTWARHHY TDWISMARMQ AKMKAFNKVY REAVRKQDVN QIEKLKKIQT
KNMAENMQIQ SNSMKATMFT MFIVISIFTW LWIFLQTKAH YTLVAIPWSN VIELNRVQYL
FPNWLLIYSA FTMPLSWVVT YIFKYMEFRK KVKELPAEIE AVE