Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1488 |
Symbol | |
ID | 8828456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 1435694 |
End bp | 1436971 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | nucleic acid binding OB-fold tRNA/helicase-type |
Protein accession | YP_003483856 |
Protein GI | 289597160 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.284076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGATT TTGACAGGCA TGTTGATGAT ATATACAATA TCCTTGGGGG GAAAGTGGAT AGAGAGACGA TAGCAAAGGA GCTTCGCAAT TGGATTGTAA ATTTCAAAGT GCCAATTATA GAGGCAAAGA GAAGTATAGT ATCAAAATTG GGAGGGGATC CTTCCAAGCT CACAAATAAT GAGAAAAAGG TTGTGGATTT AGGCCCGAAT GATGCAAGAG TTGATATAAA ATTAAAGGTT ATAACAATAA ACTCAAAGGA GTATGAGCTT GATGGAATAA ATAGGAAAAT GTACTATGGA ATTGTGGGTG ATGAGACGGG TACTATACCC TTTACCGCTT GGAAATTAGA TGTGGAATTG CGCAAGGGAG ATTGCGTAGA GGTTAAAAAC GCGTATACTA GAGAATGGCA AGGAAAAGTT CAACTTGTTT TTGGTAATAA CACAAAGCTC TCTCTTTTGC CTCCTAATTC GGTTAATGTG AAAACAACAA TCAATCCTGC AAAAATAGTT GAATTGCATC CCAAGATGGG TTTTGTAGAA GTTGTGGGTA AGATACTTGA AGCAAATCCC AAGGAAGTAA TGGTTGATGG AGTACCAAGA AAAGTTTATG AAGGCATAAT AGGCGATGAT ACAGGCGAAA TTCCATTTAG TGCTTGGGAT ATAGAAGTGC ATAAGGGGGA TGTGCTCCGT ATCTCTGGTG CCTATGTGAG AACATTTAGG GGTATGCCTC AGCTTGTGTT TGATCCGAGA GCGAGCATAG AAAAAAGGGA AGAGAATATA GATGTTAGAG AGATTCCAGT TACATTGGAG AGCTTGGAAG GAAAAGGGGG ATTCAATGTT CTTGTTGAAG GAGTTATAAT TGATGTAAAG AAAGGAAGCG GATTGATTTA CAGATGTCCA GAATGTGGAA GGGTTCTAAC TTCCACGATT TGCCCAGTGC ATGGTAAGGT GACTCCCAAG CCAGATTTGA GGATAAAAGC AGTCCTTGAT GATGGCACTG GCGGAATGAT TTGCATATTC AATAGAGAGC AAACTGAGAA GATTCTCGGT ATAGATGTGA ATAAGGCAAT ATCCATCGTG CAAGAGAATT TTGGAAATAT GATGGTTATA AGGGAGATGA TTGAAGAAAA ATTAATAGCA GTCCCTATGA GATTGAGGGG AAATGTAATA TCAAAAGAGA AATACGGTCT GACTATGTTA GTTAGAGATT TTGACTTCAT AAATCTTGAG GATATAGCCA AGAACGCTGA AAATCTACTT GAGGAGTTGG GGTGGTGA
|
Protein sequence | MDDFDRHVDD IYNILGGKVD RETIAKELRN WIVNFKVPII EAKRSIVSKL GGDPSKLTNN EKKVVDLGPN DARVDIKLKV ITINSKEYEL DGINRKMYYG IVGDETGTIP FTAWKLDVEL RKGDCVEVKN AYTREWQGKV QLVFGNNTKL SLLPPNSVNV KTTINPAKIV ELHPKMGFVE VVGKILEANP KEVMVDGVPR KVYEGIIGDD TGEIPFSAWD IEVHKGDVLR ISGAYVRTFR GMPQLVFDPR ASIEKREENI DVREIPVTLE SLEGKGGFNV LVEGVIIDVK KGSGLIYRCP ECGRVLTSTI CPVHGKVTPK PDLRIKAVLD DGTGGMICIF NREQTEKILG IDVNKAISIV QENFGNMMVI REMIEEKLIA VPMRLRGNVI SKEKYGLTML VRDFDFINLE DIAKNAENLL EELGW
|
| |