Gene Aboo_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1488 
Symbol 
ID8828456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1435694 
End bp1436971 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content39% 
IMG OID 
Productnucleic acid binding OB-fold tRNA/helicase-type 
Protein accessionYP_003483856 
Protein GI289597160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.284076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATT TTGACAGGCA TGTTGATGAT ATATACAATA TCCTTGGGGG GAAAGTGGAT 
AGAGAGACGA TAGCAAAGGA GCTTCGCAAT TGGATTGTAA ATTTCAAAGT GCCAATTATA
GAGGCAAAGA GAAGTATAGT ATCAAAATTG GGAGGGGATC CTTCCAAGCT CACAAATAAT
GAGAAAAAGG TTGTGGATTT AGGCCCGAAT GATGCAAGAG TTGATATAAA ATTAAAGGTT
ATAACAATAA ACTCAAAGGA GTATGAGCTT GATGGAATAA ATAGGAAAAT GTACTATGGA
ATTGTGGGTG ATGAGACGGG TACTATACCC TTTACCGCTT GGAAATTAGA TGTGGAATTG
CGCAAGGGAG ATTGCGTAGA GGTTAAAAAC GCGTATACTA GAGAATGGCA AGGAAAAGTT
CAACTTGTTT TTGGTAATAA CACAAAGCTC TCTCTTTTGC CTCCTAATTC GGTTAATGTG
AAAACAACAA TCAATCCTGC AAAAATAGTT GAATTGCATC CCAAGATGGG TTTTGTAGAA
GTTGTGGGTA AGATACTTGA AGCAAATCCC AAGGAAGTAA TGGTTGATGG AGTACCAAGA
AAAGTTTATG AAGGCATAAT AGGCGATGAT ACAGGCGAAA TTCCATTTAG TGCTTGGGAT
ATAGAAGTGC ATAAGGGGGA TGTGCTCCGT ATCTCTGGTG CCTATGTGAG AACATTTAGG
GGTATGCCTC AGCTTGTGTT TGATCCGAGA GCGAGCATAG AAAAAAGGGA AGAGAATATA
GATGTTAGAG AGATTCCAGT TACATTGGAG AGCTTGGAAG GAAAAGGGGG ATTCAATGTT
CTTGTTGAAG GAGTTATAAT TGATGTAAAG AAAGGAAGCG GATTGATTTA CAGATGTCCA
GAATGTGGAA GGGTTCTAAC TTCCACGATT TGCCCAGTGC ATGGTAAGGT GACTCCCAAG
CCAGATTTGA GGATAAAAGC AGTCCTTGAT GATGGCACTG GCGGAATGAT TTGCATATTC
AATAGAGAGC AAACTGAGAA GATTCTCGGT ATAGATGTGA ATAAGGCAAT ATCCATCGTG
CAAGAGAATT TTGGAAATAT GATGGTTATA AGGGAGATGA TTGAAGAAAA ATTAATAGCA
GTCCCTATGA GATTGAGGGG AAATGTAATA TCAAAAGAGA AATACGGTCT GACTATGTTA
GTTAGAGATT TTGACTTCAT AAATCTTGAG GATATAGCCA AGAACGCTGA AAATCTACTT
GAGGAGTTGG GGTGGTGA
 
Protein sequence
MDDFDRHVDD IYNILGGKVD RETIAKELRN WIVNFKVPII EAKRSIVSKL GGDPSKLTNN 
EKKVVDLGPN DARVDIKLKV ITINSKEYEL DGINRKMYYG IVGDETGTIP FTAWKLDVEL
RKGDCVEVKN AYTREWQGKV QLVFGNNTKL SLLPPNSVNV KTTINPAKIV ELHPKMGFVE
VVGKILEANP KEVMVDGVPR KVYEGIIGDD TGEIPFSAWD IEVHKGDVLR ISGAYVRTFR
GMPQLVFDPR ASIEKREENI DVREIPVTLE SLEGKGGFNV LVEGVIIDVK KGSGLIYRCP
ECGRVLTSTI CPVHGKVTPK PDLRIKAVLD DGTGGMICIF NREQTEKILG IDVNKAISIV
QENFGNMMVI REMIEEKLIA VPMRLRGNVI SKEKYGLTML VRDFDFINLE DIAKNAENLL
EELGW