Gene Aboo_1484 details

Gene Information

• Locus tag: Aboo_1484
• ID: 8828452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1432213
• End bp: 1432863
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 35%
• Product: ABC transporter related protein
• Protein accession: YP_003483852
• Protein GI: 289597156

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCATCTTC AAGCTTTGGA TATTCACAAA CATTATGGAA AAAAGCCAGT TTTACGAGGA 
GCCAGTTTAA ATGTAGAGCG GGGAGATATA GTCATGATAA GAGGGCAATC AGGTATAGGA 
AAAACCACTT TTTTAAATAT AATTTCAGGA ATAGACCTTC CAGATAAGGG AAGAGTTATA 
ATCGATTCTA AAGATATAAC CAAGATGAGC GAGAACGAAA GGGCAAAGTT TAGATTACAC 
AAGATAGGAC TAATCTTTCA AAGCATGAAC TTAATAGAGG ATTTGAGCGT GATTGAAAAC 
ATTGCGTTGC CATTAAAACT TGCGGGAAAG AAATGGAAAA AAAGAGTGAA TGAGCTTTTA 
CAATATCTTA ATATAGAGAA TGTAAAGCAT TCATTTCCAA CTGAGTTGAG TGGTGGAGAG 
ATGCAGAGAG TAGCCATAGC AAGAGCTATT GCAAATGAAC CTGAAATATT AGTTGCGGAC 
GAGCCCACCT CAAATCTTGA TGATGAGAAT ACAGAAAATA TTGTGAATTT ATTAAGAAAA 
ATAAATAAAG AGATGAATAT GAGCATAATA ATTGCAACTC ATGACCCCAG AATGGAAAAC 
TTGGATGCAA AAAGATTCTT TATGAAAGAG GGAAAACTGT ATGAAGGATA A 

 

Protein sequence

MHLQALDIHK HYGKKPVLRG ASLNVERGDI VMIRGQSGIG KTTFLNIISG IDLPDKGRVI 
IDSKDITKMS ENERAKFRLH KIGLIFQSMN LIEDLSVIEN IALPLKLAGK KWKKRVNELL 
QYLNIENVKH SFPTELSGGE MQRVAIARAI ANEPEILVAD EPTSNLDDEN TENIVNLLRK 
INKEMNMSII IATHDPRMEN LDAKRFFMKE GKLYEG