| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1442 |
|---|
| Symbol | |
|---|
| ID | 8828407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 1377631 |
|---|
| End bp | 1378689 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | Glycosyltransferase 28 domain protein |
|---|
| Protein accession | YP_003483811 |
|---|
| Protein GI | 289597115 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATAG CATTTGGAGT GTGCTCTCTT GGAATAGGAC ATGCCACGAG GAGTGCTCCC
ATAATAGCAA AGCTCGTAGA GGAAGGACAT GAAGTGGTAA TAATCACCTA TGGTAGAGCT
GCTGATATAT TAAAAAAGGA GTTTCCTTAT CTGAAAGTTT ACGAAATTCC AGATTTTCCC
ATTCAATATC CTGAGAGAGC ACACCAGTTC ATTCCCTACA TATTTATGAA TTCAAACAAG
ATTGCAAGAT CAATATTTAA AGCCCATAAA AATTTTTTAG GCTTGCATGA GGAACAAAAT
TTTGATTTAA TTATCTCTGA CAGCAGATTT GATGTTTTTC ATAGAAATGT GCCTTCATTT
CTTATAATTC ATCAACTTAG AATTATGGTT CCTCTTCACA TTTTAAGAGC AGGAATATTG
GTGTATAACG CATACATATC CAGATTCTTC AAAAAAATCC TTGTTCCAGA TTTCAGAGAG
AATTCTTTGA GTGGGGATAT GTCCCACAAT CTCAAGATAA TTGATGGAAA TAAAATTGAG
TACATAGGCC CGTTGTCTCC ATTCAAGCAC CGAGATTTAC CGAGGGATAT AGATGTTTTG
ATTTCAATAT CTGGGCCTGA ACCACAGAGA ACTCTCTTTG AGAGAAAGAT TATGAAAAGT
ATTGATGGGT TGGATGGAAA TATAGTTATA ACCCTGGGCA AACCTGATGA GAAAATTAGA
AATGATGACT TAAAAATATA TTCATATCTA ACTATGGATG AGAGAGAAGA AATAATGAAT
AGAAGTAAGC TTATAATTTC TCGTTCAGGG TACTCTACGA TCATGGATTT GTACGCCATA
GGTGGAAAAG CCATGTTTGT TCCCACTCCC GGCCAGCCAG AGCAGGAGTA TCTGGCAAGG
TACTTGGAGC GTAGAGGTAT TGCAGGATAT ATGACACAGG AAAATTTGGA TTTGAGAGAA
ATTATAAGTA GAGCAGGTAA TTATAGCGGC TTCAAAGGAA AATATGATAC TCGTATCTCA
GTTGAAAATG CCATAAGGGT GATCACCGAA TGGAGTTAA
|
|---|
| Protein sequence | MKIAFGVCSL GIGHATRSAP IIAKLVEEGH EVVIITYGRA ADILKKEFPY LKVYEIPDFP
IQYPERAHQF IPYIFMNSNK IARSIFKAHK NFLGLHEEQN FDLIISDSRF DVFHRNVPSF
LIIHQLRIMV PLHILRAGIL VYNAYISRFF KKILVPDFRE NSLSGDMSHN LKIIDGNKIE
YIGPLSPFKH RDLPRDIDVL ISISGPEPQR TLFERKIMKS IDGLDGNIVI TLGKPDEKIR
NDDLKIYSYL TMDEREEIMN RSKLIISRSG YSTIMDLYAI GGKAMFVPTP GQPEQEYLAR
YLERRGIAGY MTQENLDLRE IISRAGNYSG FKGKYDTRIS VENAIRVITE WS
|
|---|
| |