| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_1436 |
|---|
| Symbol | |
|---|
| ID | 8828401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 1372233 |
|---|
| End bp | 1373357 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | |
|---|
| Product | Pyridoxal-dependent decarboxylase |
|---|
| Protein accession | YP_003483805 |
|---|
| Protein GI | 289597109 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.687898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAA AAGAAATAGA GGATTTGCTG CAAAAATACT ACCTTAAAGA TATGCATTAT
GAAGATGGAA AAATCCTAGG CTCAATGTAC ACCAAGCCAC CAGAAATTGC ATTAAAGGCA
TTTTTCAAAT TTTATCAAGC CAATTTGGGA AATCCGGGAT TGTACAAAGG CACTGTGGAG
ATAGAAAGAG AGGTTGTAAA ATTCCTGTTG AGATTAACAT CTGGCAAAGA TGATTTTTTC
GGCCATGTGG TAAGTGGAGG CACTGAAGCG AATGTAATAG CCCTCTGGGC TGCAAGGGAG
ATGGGCTACA AAAGAGTACT TGCTACTCAA GATGCTCATT TCTCAATAAG AAAGGCAGCA
AATTTACTTA AATTATCATT GGAAAATGTA GAAATAATAA AGGGAAGAAT GAGTATTGAA
GACCTTGAGA GAAAAATAAA AGGGGGGGAT ATAATAGTAG CGACTGCAGG TACAACACCT
CTTGGATTTA TAGATCCAAT CGAGGAAATA GGAAAAATTT GTGAAATGCA TAATTGCTTT
CTGCATGTGG ATGCTGCCTT TGGAGGCTAT GTTATACCAT TTTTGAGAGA ATTGGGGTAT
ACAAATAAAA AATTTGGATT TGATATTTCG GCCGTTAGAA CAATTACCAT TGACCCCCAT
AAAATGGGTA TGGCACCGTA TCCTGCCGGA GGAATTGTGA GCAAAGAGAA CATATTTGAG
AAAATAGAAA TAGAAGCACC ATACTTGATG GTGGGAAAGA ATGAGGGTTT GCTAGGTACA
AGGCAAAGTG GGAGTGTTGC AGCAGCATAC GCAGCCCAAC TATACTTTGG ATGGGATGGA
TACAGAGAGA TAGTAAAGAA ATGTATGGAA AATACAAATT ACCTTGTAAA AAGGGCAAGA
GAGGAGAATT TTGAGATTTT AGAAATGCCT GAAATGAACA TAGTAAATAT AAAAATTAAG
AATGTGGGGA AAGTGAAAAA GGAATTGTAT GCAAGGGGAT GGGGTATTTC CACAAATCCA
AAGTATTCAT CATTGAGGAT AGTTGTAATG CCCCATGTGA CAAAAGAAAT TATAGATGAA
TTTCTAGGTG AGCTTAAAAA TATAAAAAAG AGTTATGGGT TATAG
|
|---|
| Protein sequence | MDEKEIEDLL QKYYLKDMHY EDGKILGSMY TKPPEIALKA FFKFYQANLG NPGLYKGTVE
IEREVVKFLL RLTSGKDDFF GHVVSGGTEA NVIALWAARE MGYKRVLATQ DAHFSIRKAA
NLLKLSLENV EIIKGRMSIE DLERKIKGGD IIVATAGTTP LGFIDPIEEI GKICEMHNCF
LHVDAAFGGY VIPFLRELGY TNKKFGFDIS AVRTITIDPH KMGMAPYPAG GIVSKENIFE
KIEIEAPYLM VGKNEGLLGT RQSGSVAAAY AAQLYFGWDG YREIVKKCME NTNYLVKRAR
EENFEILEMP EMNIVNIKIK NVGKVKKELY ARGWGISTNP KYSSLRIVVM PHVTKEIIDE
FLGELKNIKK SYGL
|
|---|
| |