Gene Aboo_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1407 
Symbol 
ID8828371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1344679 
End bp1345458 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content36% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003483776 
Protein GI289597080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGTGC TTGCAGCTAT TGTGCCTCAT GGTGATGAGA TATTGATTCC TGAAGATGAA 
GAGTCTGCAA GATTGCACAA TGCAATGATA GAGCTCGGAG AGAGAATAAA AGAGAAAAAA
GTGGATGAGT ATATTTTTGT ATCCCCACAC CATTTGAGAA TTCAAACGCA TATGGCAATA
ATGCTAACTG AGTACCTTGA AGGCTCTTGG AAATATAAGA ATCTTAGATT CAGAAGAAAG
ATAAAATGCA ATAAAGATTT GGCATGGGAA ATATATGAAA AGACAAGAAA GAGTTTACCT
GTTGTTGGAG TGAATTTTGG AGCATTAGAA GGAGAATTAT CCAAGATTTG CCTTGATTGG
GGAACCTTAA TTCCTCTTTA CTTCCTTCCT AAAAGAAAGA TGGTTCTAAT GACTCCTGCC
AGAGAGATAC CCTATGAATC TCTGATAGAT TTTGGCAAGA TTGTAGGGGA AATAGTAATG
AATAGCAAAA AGAGAATAGG GGTTATAATA AGTGCTGATC ACGCTCATGC TCATAGGAAA
GATGGTCCAT ATGGATACCA TCCAGACGCG GATTACTACG ATAAGTACAT AATGGAAAAT
CTTGAAAATC TCGATATGTT GTTAAAATTG AAAGAAAAAA CCATTGAAAA TGCTAAACCG
GATAGCTTCT GGCAACTTTT AATTTTAAAT GGTATACTGA AAGGGAATCC ATTAAAATTA
AAAAAGAAGG TATATGGTCT GCCAACCTAT TTTGGTATGG CTGTTGCATG GTATGAGTGA
 
Protein sequence
MLVLAAIVPH GDEILIPEDE ESARLHNAMI ELGERIKEKK VDEYIFVSPH HLRIQTHMAI 
MLTEYLEGSW KYKNLRFRRK IKCNKDLAWE IYEKTRKSLP VVGVNFGALE GELSKICLDW
GTLIPLYFLP KRKMVLMTPA REIPYESLID FGKIVGEIVM NSKKRIGVII SADHAHAHRK
DGPYGYHPDA DYYDKYIMEN LENLDMLLKL KEKTIENAKP DSFWQLLILN GILKGNPLKL
KKKVYGLPTY FGMAVAWYE