Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1404 |
Symbol | |
ID | 8828367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 1341857 |
End bp | 1342834 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003483773 |
Protein GI | 289597077 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.343545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGAAGCT ATGTGTTTCC AGCCCTGATA ATACTCTTAA CAGCAGTATT CTTCGGTTCC TACGCATTTG TCACAGTGTC CATAGCAATT TTTGTCCTTA TATTTTTAAA AGATAGAAAC AAAAAATACT TAATTTTCTT ATTTTTAGCT TTTATGGCAT TTATACATCC GCTTCTTGGT ATAGTGCCTA TAATCTACCT TTTGTTAATA ATGGAAAGGG ATAACTTTTA TCGTATTGCT TACATTTTGG GCTCTCTATT TCTGGTATTT ATTATATTTC CAATTTTGAA TCTTTTACTT TATTTCTCTC CTCAGAGCAT TTACGATAAA TCATTAATAA ATGCAATAAC CGTAAGTTTT GTGGCAGCCA CCTCATCAAC GGTTATTGGC CTCATCTTTG CTCTGCCGAT AGGATATGTA CTAGCAAGGA GAAACTTTAT AGGAAAAAGC ATAGTAGAGA GCATAATAGA TTTACCAATA GTTGTACCTC ACACGGTGGC GGGCATAATT CTTTTACTGG TATTTGGAAC CTCGGGGATA TGGGGAGCCC CCTTGGAAGA GATCGGAATA AGATTTTACT ATGCTATGCC TGGGATAATA GTAGCAATGC TGTTTGTTAG CGCACCGTTC CTGATAAATC AGGTAAGAGA AGGAATAAAG AAAATAGATG AAAGATATGA GTACACGGCT ATGAGTCTTG GGGCTGGGAG ATTTAGAACT TTTATGGAAA TCATACTTCC CCAAATTAAA GGAAATATTC TCACAGGCTC GGTGAATTCT TGGGCTCGTG CTATCAGCGA ATTTGGGGCG GTTATGATGA TTGCCTTCTA TCCTATGGTT GCTCCAACTT ATATTTACTT CCTCTATACG AATTATGGTT TGAAGGCAGC GCTTCCTGCT ACTGCGTTTC TGTTGCTGAT AACATTAGTT GTCTTCATAT TTCTGAAAAT AATTGCGGAG AGGATGAAAA ATGCTTAA
|
Protein sequence | MRSYVFPALI ILLTAVFFGS YAFVTVSIAI FVLIFLKDRN KKYLIFLFLA FMAFIHPLLG IVPIIYLLLI MERDNFYRIA YILGSLFLVF IIFPILNLLL YFSPQSIYDK SLINAITVSF VAATSSTVIG LIFALPIGYV LARRNFIGKS IVESIIDLPI VVPHTVAGII LLLVFGTSGI WGAPLEEIGI RFYYAMPGII VAMLFVSAPF LINQVREGIK KIDERYEYTA MSLGAGRFRT FMEIILPQIK GNILTGSVNS WARAISEFGA VMMIAFYPMV APTYIYFLYT NYGLKAALPA TAFLLLITLV VFIFLKIIAE RMKNA
|
| |