Gene Aboo_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1399 
Symbol 
ID8828362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1337136 
End bp1337957 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content39% 
IMG OID 
ProductRNA polymerase insert 
Protein accessionYP_003483768 
Protein GI289597072 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTC ATATATTGGA ATTGCAGGAT AGGTACATTA AATTTGAAAT AAAGGGTATA 
ACTCCTTCAG TAGCCAATGC TTTGAGAAGA ACCTTAATAA ATGATATTCC CAAACTCGCA
ATACACAAGG TAATATTCCA CCATGGGCAA ATAAGGGATA TGGAAGGAAA TGTGTATGAT
TCTTCCACGC CATTATTTGA TGAAATCATA GCACACCGCC TTGGGCTGAT TCCTCTGCCC
ACCGATTTAA ATATGAAGTT CAGAGATGAA TGCGATCACC CTCCAGATGA GGGATGCCCT
CTATGTACTG TCACATACAC TTTAAATAAG CATGGTCCTG CAACAGTATA TTCTGGAGAT
TTGATTCCTG TTGGAGATGA GAAATTCAAG CCCGTTGATC CTCTTATTCC AATAGTGAAA
CTGAAGGAGC ACCAAGCCAT ACTTCTTGAA GCAGAGGCAA TTATGGGCAC AGCAAAGGAG
CATGCTAAAT GGCAGGTTAC AAGTGGAGTA TCTTACAAGT ACCACAGAGA GATAAAAGTA
AACAAGAAAG ACAGCGAACT GTGGGAGAAA GTTAAAAAAT CTTGTCCAAA GAATGTGATT
AAAGAGGATG ATAAGTTCAT AATTTTTACA GATGATATAC CTTGCAAAGA GATTGCGGAG
ATACTTTCCT TTGAGAACCC TGAAATAACA GAGGACGATT CTTGGTTCAT ATTCGAATTT
GAAACCGATG GAAGCTTGAA AGCCATTGAT ACCCTTGAAT ATGCAATAAA AAGGTTGAAA
ACAAGGTTTA ACACGCTAAG GGAACACGCA TCTCTGGGGT AA
 
Protein sequence
MEFHILELQD RYIKFEIKGI TPSVANALRR TLINDIPKLA IHKVIFHHGQ IRDMEGNVYD 
SSTPLFDEII AHRLGLIPLP TDLNMKFRDE CDHPPDEGCP LCTVTYTLNK HGPATVYSGD
LIPVGDEKFK PVDPLIPIVK LKEHQAILLE AEAIMGTAKE HAKWQVTSGV SYKYHREIKV
NKKDSELWEK VKKSCPKNVI KEDDKFIIFT DDIPCKEIAE ILSFENPEIT EDDSWFIFEF
ETDGSLKAID TLEYAIKRLK TRFNTLREHA SLG