Gene Aboo_1397 details

Gene Information

• Locus tag: Aboo_1397
• ID: 8828360
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1336183
• End bp: 1336746
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 41%
• Product: ribosomal protein S4
• Protein accession: YP_003483766
• Protein GI: 289597070

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 0.861603
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAGATC CTAGGTTCAA TAGAAAAAAG TACGAGACTC CCAAACATCC TTGGGAAGCA 
GATAGGATAA AAGAGGAATG GGAACTTCAG AAAAAGTATG GGCTTAAAAA TAAGAGGGAG 
ATCTGGAAAG CCAAATCTCT GTTAAGGAAT TTTAGGGGAC AAGCTAGGCA GCTTCAGGCA 
AAATTGAGAT ATGGAAATCC TCAAGCTGAG AAAGAGCAGA AATTGCTTTT TGACAAACTC 
ATAAGATTGG GTATACTCAA CGAGGCGAAT GCCACTTTGG ATGCTGTTTT ATCACTTACT 
GTTGAAGATA TTCTGAGGAG AAGATTACAG ACAATAGTGT ACCTAAAAGG TCTTGCAAGA 
ACGCCAAAGC AAGCAAGGCA GTTTATTGTG CATGGTCATA TTGCAATAGG AGATCGAAAG 
GTCACAATAC CAAGTTATCT GGTGAGAAAG GAGGAAGAAG ATCTAGTGGA TTATTACAAG 
TACTCACCTC TTGCTGATGA AATGCATCCC ATGCGCCCCC AAGTAATTGA AGGACAAGAA 
GAAGTGAAAG AGGAGGGTGA GTAA 

 

Protein sequence

MGDPRFNRKK YETPKHPWEA DRIKEEWELQ KKYGLKNKRE IWKAKSLLRN FRGQARQLQA 
KLRYGNPQAE KEQKLLFDKL IRLGILNEAN ATLDAVLSLT VEDILRRRLQ TIVYLKGLAR 
TPKQARQFIV HGHIAIGDRK VTIPSYLVRK EEEDLVDYYK YSPLADEMHP MRPQVIEGQE 
EVKEEGE