Gene Aboo_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1382 
Symbol 
ID8828344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1323053 
End bp1323910 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content38% 
IMG OID 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_003483751 
Protein GI289597055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0547025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCATG AGATAACTGA GCATCTTATG TACTACAAAG CACTCTTGGA TGAGGACATT 
GATGTGGATT ATTACATACA CATGGCGCAG AGTTTAGAGG ATGGGATACA CATAACTGCA
AAAAACCCTG TAGATAAGGC AATAGCAATA GTTTTTGAAT TAGTTATGGA TGAGAAGCTT
GACCCTTGGA AGATTGATTT GATAAAATTC ACAAAACTCT ATATGGAGAG GGTAAAGAAG
GAGAAAGATA TAGATTTCAT AATTGCGGGC AAGATAATAC ATATGGCTTG GAACATACTT
ATGAGAAAGA GCGAGGATGT GCTTGACGAG GTGGAGAGAG AGGTCTACTA TGTGGATTCA
GATTTCTTTG ATATAGACAT ATCTCCATTC GAACCCTACG AAGAAGAAAT CATAGATGTG
GAGCCAGATA TTGAGATAAA AGAACCTGTT AGAAGAGAGG AAGAGAGACC TGTAAGCTTA
ATGGAACTTC TCCAGGCAAT AAATGAAGCG AGAAGAGAAG TGGAGATGAA GAAGAAGCAG
AGGAAGATAA GAGAGAAATT CAAATTCAAT TTAGATGAGA AGGTGCATAG GGAAGATTTG
GAGGAAGAAA TAAAGGAAGT ATGGTCCCGC TTGAGCGATG TAAATGGAGA TGAGATACCA
TTATCCCTTC TTTACGATGG AACTAGGGAA GATTTCATAA AAGTTTTCTT GTCTCTCTTA
TTTTTAGAGA GATTCAAAAA GGTAGAATTG CAGCAATATG TGCCTTATGG TGAGATAAAC
ATAAGAATAT TGGTGCCCCA GGAGCTTAGA AACATAGAGT TTATGAACCC ACCAGAGATA
AGAATAGAAT CTATTTAG
 
Protein sequence
MQHEITEHLM YYKALLDEDI DVDYYIHMAQ SLEDGIHITA KNPVDKAIAI VFELVMDEKL 
DPWKIDLIKF TKLYMERVKK EKDIDFIIAG KIIHMAWNIL MRKSEDVLDE VEREVYYVDS
DFFDIDISPF EPYEEEIIDV EPDIEIKEPV RREEERPVSL MELLQAINEA RREVEMKKKQ
RKIREKFKFN LDEKVHREDL EEEIKEVWSR LSDVNGDEIP LSLLYDGTRE DFIKVFLSLL
FLERFKKVEL QQYVPYGEIN IRILVPQELR NIEFMNPPEI RIESI