Gene Aboo_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1370 
Symbol 
ID8828332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1311843 
End bp1312541 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content40% 
IMG OID 
Productcobalamin (vitamin B12) biosynthesis CbiM protein 
Protein accessionYP_003483740 
Protein GI289597044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.711039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATAC CAGATGGATA TTTAGGACCT GCTACATGTC TATTCTTTTA TATAGTGATG 
ATACCAATTT GGTACACGGC ATTTAAAATA GCTCGTAAAA AAATGAATGA AAAAAGCGTG
CCAATGCTTG CTATGCTCTC AGCATTTGCT TTCATAGTTA TGATGTTTAA CTGGCCCGTG
CCAGATGGAA CAACTGCTCA TATGGTAGGA GCGGTGCTTA TAGCAATATT ATTAGGGCCA
TGGGCATCAG TGATAGCAAT AAGTGTAGCA TTACTTATTC AGGCGTTTTT CTTTGGTGAT
GGTGGATTAA CAAGTTATGC TGCCAACTGT TTTAATATGG GTGTGGTGAT GCCCTTTGTG
GGATATTATG TATATCGGCT ATTGATGAAA GTGATTAAGG ATAAAAATCC TTGGTCAGTA
GGGATTGCCG GAGCTGTTGG AGGATATATA GGTATAAATG CGGCTGCTTT TATGGCAGGG
TTAGAACTCG GTATTCAACC GTTTATAGCT CCTGGGTACT GTCCTTTTCC ATACACTTTA
TCAATACCTG CGATGCTCTT TGCACATCTG ACAACTGCTG GACCTGTTGA AGCGGTAGTT
ACTGGATCCG TGTTGTATTA TCTTAAATCT AAGAAGTCAA ATCTTTTGGA ACTTCCAAAG
CTTTTATTAA GGGGGTGTGA TGTTGGAAGC ATGGATTAA
 
Protein sequence
MHIPDGYLGP ATCLFFYIVM IPIWYTAFKI ARKKMNEKSV PMLAMLSAFA FIVMMFNWPV 
PDGTTAHMVG AVLIAILLGP WASVIAISVA LLIQAFFFGD GGLTSYAANC FNMGVVMPFV
GYYVYRLLMK VIKDKNPWSV GIAGAVGGYI GINAAAFMAG LELGIQPFIA PGYCPFPYTL
SIPAMLFAHL TTAGPVEAVV TGSVLYYLKS KKSNLLELPK LLLRGCDVGS MD