Gene Aboo_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1367 
Symbol 
ID8828329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand- 
Start bp1310078 
End bp1310782 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content34% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003483737 
Protein GI289597041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.052808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTG CCCAGTTGGA GCATGTAAGT TATTCCTATC GGAATGATCC GGCCATAGTG 
GATATTAATT TAAATATAAA AAGAGGGGAG GTTATATACC TTGTAGGTGA AAATGGTGCA 
GGAAAGAGTA CTCTTCTATT GATATTGGCT GCTCTATTTG TGCCTACTAG AGGTATTGCC 
AAGATATTTG GAAAAGTTAT AACTGAGAAA GTTACTAAAG ATGTATGTCT GCGTAGAAAG 
ATAGGAATAG TATTTCAGGA TCCAGATATA CAGTTATTCT CACCCACAGT GTATGACGAT 
GTCTCCTTTG CACCTAGGCA TCTTACAGGA GAGGATTATA AAAAATATAC TGAAAAAGCT 
ATGAGAATTA TGAAAATATC TCATTTAAAG CAGAGACACC CATATGAACT GAGCGAAGGA 
GAGAAAAAAA GGGTGGCTAT AGCAACTGTT TTATCATATG ATCCGGAATT TATGTTATTT 
GATGAACCAA CTGCCAATAT GGATGGTAAG GGTAGGAGAG AGTTTAAATT ATTGCTTAAA 
AAATTAATTG ATGAGGAAAA AACAATAGTA ATAGCAACTC ATTTGCTAAG GGATATAGTT 
TATGCTACCA GAATAATAGG AATGTATGAG GGTAAGATCG AGTATGATGG TGACCCATCT 
ATATTAAAAA ATAAAAAATA CCTGGAAAAA TTAAATGTTA TTTAA
 
Protein sequence
MDIAQLEHVS YSYRNDPAIV DINLNIKRGE VIYLVGENGA GKSTLLLILA ALFVPTRGIA 
KIFGKVITEK VTKDVCLRRK IGIVFQDPDI QLFSPTVYDD VSFAPRHLTG EDYKKYTEKA 
MRIMKISHLK QRHPYELSEG EKKRVAIATV LSYDPEFMLF DEPTANMDGK GRREFKLLLK 
KLIDEEKTIV IATHLLRDIV YATRIIGMYE GKIEYDGDPS ILKNKKYLEK LNVI