Gene Aboo_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1341 
Symbol 
ID8828303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1285767 
End bp1286825 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content38% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003483711 
Protein GI289597015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.238943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTA GGGATTACAT AATACGCAGG CTGATATTTA CGATATTCAT AATAATAGGC 
ATTACTCTCA TTACATTCAT TTTAATGCAT GCTCTTCCCG TGGATCTTGC CGCTATGTAT
GCTGGAAATC CTAGAGATAA TCCTGCTACA GAGGTAAATG AAGCAGAGAT GATGCTTAAA
GCTGCAAGGG AGAAATTTGG GTTAGATAAA CCGTTATGGG TGCAGTATGG TTATTACCTC
TATAATCTCT TCTTGAAATT TGATATGGGC ATCTCTATGC GTACCCATAA ACCTGTGGGA
GAGGAGATAA TCAATAGATT ACCTGCGACA TTGGAACTAA TTTTTGTATC AATTGTCATT
GCTTTTGTAG CAGGTGTGGC AGTTGGAGTA ATCAGTGCAA AGAAGCAGAA TAAGTTTACA
GACCATATTA TGAGAATAAT TTCTATTAGC GGCGTATCTC TACCTGCTTT TTGGCTAGCC
ATACTTCTTC AATTTATATT TGGAAGCTGG ATGGGATGGT TTCCAATAAG TGGAAGATAC
GATCCTCAAT TATTCCATCA ATATCCATTT CATACTATAA CGGGATTCTA TCTTATAGAT
ACCCTTGTTC AGGGTAATTT TAAAATGTTT GGCGATGTGG CTTGGCATCT TATATTGCCA
TCTATCGCTA TGGCCTCGTA TCCATTTGGG GCAATAGCAA GAATGACTAG AGCCACCCTT
TTGGAAGTTA TGGATGAGCA ATACATATAC TCTGCACGAG CAATGGGTCT CCCTAAAAGG
TTAATAACAA AATATGCACT AAAGAATGCT CTTGGGCCAA CTTTAACAAT AACAGGATTA
AACTTTGCTT ACATGCTCAC AGGAGCGTTC TATGTGGAAT GGATATTTGG ATGGGGAGGT
ATAGGATGGT TTGCGGGTAT GGCGCTTCTT AATTTGGATT ATACAGTGAT AATGGGAATG
GTTGTAGTTG TTTCTCTATT CTATGTTATT GTGAATCTAA TAGTAGACAT CATTCAGGTT
TACATAGATC CTAGAATTAC CTTGGGGGAG AAGGCATGA
 
Protein sequence
MNIRDYIIRR LIFTIFIIIG ITLITFILMH ALPVDLAAMY AGNPRDNPAT EVNEAEMMLK 
AAREKFGLDK PLWVQYGYYL YNLFLKFDMG ISMRTHKPVG EEIINRLPAT LELIFVSIVI
AFVAGVAVGV ISAKKQNKFT DHIMRIISIS GVSLPAFWLA ILLQFIFGSW MGWFPISGRY
DPQLFHQYPF HTITGFYLID TLVQGNFKMF GDVAWHLILP SIAMASYPFG AIARMTRATL
LEVMDEQYIY SARAMGLPKR LITKYALKNA LGPTLTITGL NFAYMLTGAF YVEWIFGWGG
IGWFAGMALL NLDYTVIMGM VVVVSLFYVI VNLIVDIIQV YIDPRITLGE KA