Gene Aboo_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1338 
Symbol 
ID8828300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1282303 
End bp1283397 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content36% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003483708 
Protein GI289597012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGTGA GGGAGATTAG CCATCCACTT TTATTGGTGA GGAATCTTAA AAAATACTTT 
CCAATAAAAT CAGGGGTGAT GCAAAAAGTT GTAGGTTATG TTAAGGCAGT TGATGGTGTA
AGTTTTGATA TCAATAAATC TGAGACCTTT GGAGTTGTAG GAGAATCTGG TAGTGGAAAA
ACTACCATGG GCCTCTCTAT TCTGAGACTT ATAGAGCCTA CTGATGGAGA GATTATATTT
GATGCTTCTC CTAAGATTAT GGAAGAGATA AAAATGCTGG AAGCCAAAAG GAATCTGAAT
GAAAGAGATA AAAAAAGATT AAAAGAATTA AAAGAAAAAT ACAATTTGAG AAAGAAAAGC
AAGAAAGATA TGCTAAATAT TAGAATGAAA ATGCAAGTAG TTTTTCAGGA TCCATACACT
TCTTTTAATC CGAGAATGAA TATGAGGGAC AACATAGGAG TTATCCTTAA AACTCATAAT
CATAAATTGT CTAATAAAGA TATAGATGAA TATGTTCTAG AGCTTATGGA AAAATGTGGT
TTAGCAAAAA GACATCTTAG AAGATTTCCA CATCAACTCT CTGGAGGGGA GTTGCAAAGA
GCATCAATTG CAAGAGCATT AGCTCTTAAT CCAAAATTTA TTGTAATGGA TGAACCTACT
TCAGCTTTGG ATGTATCTGT GCAAGCACAA ATTTTAGATC TTATGCAGGA TCTTCAGAAA
GAGATGAATT TGACATATCT ATTTATATCC CATGATTTAG GGGTAGTAGA GTACATAAGT
GATAAAATTG CCGTTATGTA TCTGGGCAGT ATAGTGGAAC TAGGCACTAC TACACAAATA
TTTGAAGACA TGAAGCATCC ATATACTAGA GCGCTCTTGG AATCTATTCC ATATCCTGAC
CCTGATAAGA AAGGATCAAT TAAGCCTTTA TATGGCTCTA TACCAAGTCC AAGAAATCCG
CCTCCTGGAT GCAAGTTCCA TACGCGTTGT CCTTATGCAA AGGAGATTTG CAAGAAAAAA
GCGCCGCCAT TAGTAGATGT GGGAAATGGA CATTTAGTTG CATGCTGGAA ATATGTGGAA
GGTGCTTATA AATGA
 
Protein sequence
MEVREISHPL LLVRNLKKYF PIKSGVMQKV VGYVKAVDGV SFDINKSETF GVVGESGSGK 
TTMGLSILRL IEPTDGEIIF DASPKIMEEI KMLEAKRNLN ERDKKRLKEL KEKYNLRKKS
KKDMLNIRMK MQVVFQDPYT SFNPRMNMRD NIGVILKTHN HKLSNKDIDE YVLELMEKCG
LAKRHLRRFP HQLSGGELQR ASIARALALN PKFIVMDEPT SALDVSVQAQ ILDLMQDLQK
EMNLTYLFIS HDLGVVEYIS DKIAVMYLGS IVELGTTTQI FEDMKHPYTR ALLESIPYPD
PDKKGSIKPL YGSIPSPRNP PPGCKFHTRC PYAKEICKKK APPLVDVGNG HLVACWKYVE
GAYK