Gene Aboo_1329 details

Gene Information

• Locus tag: Aboo_1329
• ID: 8828291
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1270173
• End bp: 1270760
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 40%
• Product: ribosomal RNA methyltransferase RrmJ/FtsJ
• Protein accession: YP_003483699
• Protein GI: 289597003

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAAATC GTGACTATTA CTACTGGGAG GCAAAAAAAC GCGGTTATAA GAGTCGTGCC 
TCCTTCAAAT TATTGCAGAT AAACGATAGA TTTTATCTTA TTCGTAAAGG ATATACCGTT 
TTGGATTTAG GTGCTGCACC CGGTGGCTGG AGCCAAGTGG CTTTGAAAAT TGTGGGTAGA 
GAGGGGAGGG TAATTGCCGT GGACATAAAA CCTGTAAAAT TGAGAGATGT GGAGTATATA 
AGAGGAGATG TTTACAGCGA TGAGACATTA AAAAGGATAA AGGAAAGAGC GGAAAAAGTG 
GATGTAGTTC TCTCAGATAT GTCTCCAAAA ATTTCGGGTA TAAGCTCATG GGACCATGCA 
CGCTCTATAG ACCTTGCAGA GAGAGCCCTA TTTATAGCGG AGAATGTTTT AAGAGAAAGG 
GGGCATTTTG TAGTGAAGAT CTTCCAAGGA GATATGCTCA ACGCATACCT TAAAAAATGC 
AGGGATAGAT TTGATATGGT AAAGGTGCAT AAGCCAAAGG CATCGAATAG AGAAAGTCCG 
GAAATCTATG TGGTTTGCAA AAGATTTAAA TTATCTAACA CTCCATAG 

 

Protein sequence

MKNRDYYYWE AKKRGYKSRA SFKLLQINDR FYLIRKGYTV LDLGAAPGGW SQVALKIVGR 
EGRVIAVDIK PVKLRDVEYI RGDVYSDETL KRIKERAEKV DVVLSDMSPK ISGISSWDHA 
RSIDLAERAL FIAENVLRER GHFVVKIFQG DMLNAYLKKC RDRFDMVKVH KPKASNRESP 
EIYVVCKRFK LSNTP