Gene Aboo_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1316 
Symbol 
ID8828278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1257728 
End bp1260082 
Gene Length2355 bp 
Protein Length784 aa 
Translation table11 
GC content41% 
IMG OID 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003483686 
Protein GI289596990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.198282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATGTT TATATGTGTA CTGGGATGTT CGGCTACTAA CAGCTTCGTA TTCGAGAGAG 
GAAGATGGGG TAGTTGTAGA ACTATACGGA AAGACGAGGG AAGGAAAAAG TATAGTGGTT
CGGTACAAGG GATTTAAGCC CTACTTCTAC CTTGTTGAAC CACCATCCAC GATTTTAGAG
AAATTCTCGC AGGACCCAGA GATATACAAA ATGGAAGAGG TGGAGTTATG GCACAAGGGC
AAGGTGAGGA AATGTGTTAA AGTCACTTTG CATTCCCCTT GGAAAACTCC TAGGTATAGG
AGAGAGGCTC TGGAGTTCTG CGATGTTCTC GCCGCTGATA TTCCTTTTCA TCAGCGCTTT
ATATACGATT TTGACCTTGG CTCTTGCGTG AGAGTTTATG GAAAGGAGGA AGAAAAGGGG
AAATACACGA CGGAACTCGT AGTAAATGCA GAAAAATTTG AGAACATTGG AGATTTTAAA
CCACCATTGA AAATTCTCAG TTTTGATATA GAGAACTCTA TGAAGAATGG CAGGATATTC
ACCATAGGCA TAGCCATCTG GGAAAATGGA GAGATAAGGA AAGAAAGCAT TGAAGGCGAT
GAAAAAGATA TTTTGTGGAA ATTTCTTGAG ATGATATGGA AAGAGGACCC GGATATAATC
ACGGGGTACA ATATTGATGG TTATGATTTA GAATTATTAT CGGAGAGATA CAAGAAGTAC
GGGATGGATT TTTTGATAGG GAGAGACAAG AGCAAGCCTC AGAGGATTGT GGGGCAATTC
TGGAGATTGC ATGGAAGGGT GATAGAAGAT GCATGGTGGG CTGTGAAGAA AGAGTTGCGA
TTAAAGCAAG AAACTTTACA AGCTGTGGCC ATGCACTTAT TTGGCGAGGG AAAGCTGGAT
GTTGATAGAA CGAATATTGA CGAGGAGTGG GAAAAAGATA AGGAAAAGGT CATAGAGTAT
TGCAAGAAAG ATGCTGAGCT GGCTTTGAGA ATTCTACTTC AGATTGGAAT AATAAATAAA
TACCTTGATT TAGCCACAGT TACAAAATTT CCGCTGGAGG ATGTTATACA TTCAGGCACT
TCAACTTGGG TAGATTCCCT GCTGATAAGG GAGGCAGATA GACATAATAT AGGTGTGCCT
TTACAAGGGC AGGAGAGAAA GAGCAGGAAG ATAGAAGGGG GCTATGTGCA TACAATAGAG
CCTGGTCTCT ATCATTGGGT ATGTGTTTTA GATTTCAAGA GTATGTATCC AAGCATCATA
ATAAAGTACA ATATCTGCTT CACTACGCTT AGTAAAGATG GAGACATAGT GAGCCCTACA
GGTGTGAGAT TTTTGAGCAA GGAGAAAAGA GAAGGGCTTA TACCAAAACT TCTTGCAGAG
CTCATGAAGA AGAGGGATGA GTTAAAGCGG AAAATGAAGG AAGACCCTGA TAATAGAGAT
TATTATAATG GCTTGCAGAA GGCGGTAAAA ATACTTATGA ACACATTTTA TGGTGTTTTA
GCATCATCAT TTTACAGATT CACAAATCCG GATATTGGGG CGAGCATAAC CGCATTTGCA
AGGGACACAA TAAAGAGAAT AATTGCAGAG CTTGAAAGCG AGGGAATAAA AGTGGTTTAT
GGAGACACAG ATAGTGTTTT CTTCCAATCT CCATATGAGG ATTTAGAGAA TACGATTGAG
TTCGGAATGA GAAAAGCGGA GGAAATATCA AGGAGAGAGA AGTTAATTTT AGAATTTGAA
AAAATTCTTG AGCCATTCTT TTCGCATGGG GCAAAGAAGA GGTATGTGGG CAGGATAATA
TGGCCCGATG AGGAGAAGGG CAATATGGTT GTTCGCGGCT ACGAGATTCG CCGCACTGAC
TCTTTTGATT TGCAGAGCGA GGCACAGAGA GCTGTGTTTG AAAAAATTTT GGATGGGGAT
ATCCAAGGTG CCATAGAATT GGCGAGAGAA ATAGTATCTA AGGTTCGCGC TGGAAAAGTG
CCCATTGAAA GCTTGGTCAT ATCTCGGACT GTGAAAGATT TCAAATTCTA CAAGAATCCA
GATAGTATGC CCAATGTTCA AGCAGCAAGA AAATTGATAA AGATGGGGCA AGAATTCATA
CCCGGAATGA AAGTTGCATG GATTGTGGTC AATGCAAGGG GCTCTAAGCA GGATGTAGAG
CCTTACATAC CGGGAATGGA ATTTAATAGG AAGCCAGATT ACAGGTACTA CGCAAGGAGA
GTGGCAGAGA CATTAGCGAG GATTACGGAT GTTTTTGGTG TGGATGAGGA AAATCTGCTC
ACTGGAAGCA GGCAGATAAG CTTGGGTGCA TTTGGCAAGG AGAAAAAGAA AAAAACGCTG
TTTGATTTTG AGTAA
 
Protein sequence
MRCLYVYWDV RLLTASYSRE EDGVVVELYG KTREGKSIVV RYKGFKPYFY LVEPPSTILE 
KFSQDPEIYK MEEVELWHKG KVRKCVKVTL HSPWKTPRYR REALEFCDVL AADIPFHQRF
IYDFDLGSCV RVYGKEEEKG KYTTELVVNA EKFENIGDFK PPLKILSFDI ENSMKNGRIF
TIGIAIWENG EIRKESIEGD EKDILWKFLE MIWKEDPDII TGYNIDGYDL ELLSERYKKY
GMDFLIGRDK SKPQRIVGQF WRLHGRVIED AWWAVKKELR LKQETLQAVA MHLFGEGKLD
VDRTNIDEEW EKDKEKVIEY CKKDAELALR ILLQIGIINK YLDLATVTKF PLEDVIHSGT
STWVDSLLIR EADRHNIGVP LQGQERKSRK IEGGYVHTIE PGLYHWVCVL DFKSMYPSII
IKYNICFTTL SKDGDIVSPT GVRFLSKEKR EGLIPKLLAE LMKKRDELKR KMKEDPDNRD
YYNGLQKAVK ILMNTFYGVL ASSFYRFTNP DIGASITAFA RDTIKRIIAE LESEGIKVVY
GDTDSVFFQS PYEDLENTIE FGMRKAEEIS RREKLILEFE KILEPFFSHG AKKRYVGRII
WPDEEKGNMV VRGYEIRRTD SFDLQSEAQR AVFEKILDGD IQGAIELARE IVSKVRAGKV
PIESLVISRT VKDFKFYKNP DSMPNVQAAR KLIKMGQEFI PGMKVAWIVV NARGSKQDVE
PYIPGMEFNR KPDYRYYARR VAETLARITD VFGVDEENLL TGSRQISLGA FGKEKKKKTL
FDFE