Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aboo_1301 |
Symbol | |
ID | 8828263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aciduliprofundum boonei T469 |
Kingdom | Archaea |
Replicon accession | NC_013926 |
Strand | - |
Start bp | 1246636 |
End bp | 1247451 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | |
Product | protein of unknown function DUF52 |
Protein accession | YP_003483671 |
Protein GI | 289596975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0694479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTACC CAGCAGTTGC AGGGCAGTTC TATCCAGCGG AGAGAAAGGA ATTAGAAATA ATGCTAAACG AACTTTTTAT CCATCCCATT GGTCCTGGAT CGGTTCCCTC TTTGATACCC GATGGGAAAA GAAAAATAAA AGGAGGGGTA GTGCCACATG CTGGTTATAT GTTCTCGGGT CCAGTAGCAG CTCATTTTTA TCATGCCCTC GCCTTGGATG GTTTTCCAGA GAGTTTTATA ATTATAGGTC CAAACCATTA TGGGGTGGGC TCTGGAGTTG CAATCGCATT GGAGGATTTT CTCACTCCCT TTGGAAAAGT GAAGGTAGAT AGGGAGTTGG CAAAAGACAT AGCTAAGGGA GTGATAGATA TAGATGGTTA TGCACACAGA TATGAGCATA GCATAGAAGT ACAACTTCCA TTCTTGCAAT TTTTCAAGAA GGAGATAAAA TTTGTACCGA TAACGATGCT GCTGCAGGAT TATGAAATTG CGATAGAGGT TGGAGAGATA ATAAAAGAGG CAATTGTAGA TAAGGATGTT GTTATAATTG CTTCATCAGA TTTCTCTCAC TATGTGCCCA AGAATAAAGC GTACACAAAC GATTATATGG CAATAGAGAG GATAGTAAAT GGGGATGTAA AGGGTCTTTA TGATGTGATT TATAAACACA ATATAACCAT GTGCGGATAT GGACCCGTGG CAGCTATGCT CACAGCTATA GGAGGAAAGA CCACTCTTTT AAAATATGCT ACAAGCGGAG ATATACAGCC TATGAATGAA GTGGTGGGCT ATGCTGCCAT AAAAGTTGAA AAATAA
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Protein sequence | MRYPAVAGQF YPAERKELEI MLNELFIHPI GPGSVPSLIP DGKRKIKGGV VPHAGYMFSG PVAAHFYHAL ALDGFPESFI IIGPNHYGVG SGVAIALEDF LTPFGKVKVD RELAKDIAKG VIDIDGYAHR YEHSIEVQLP FLQFFKKEIK FVPITMLLQD YEIAIEVGEI IKEAIVDKDV VIIASSDFSH YVPKNKAYTN DYMAIERIVN GDVKGLYDVI YKHNITMCGY GPVAAMLTAI GGKTTLLKYA TSGDIQPMNE VVGYAAIKVE K
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