Gene Aboo_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1294 
Symbol 
ID8828256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1240538 
End bp1241536 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content39% 
IMG OID 
ProductS-adenosylmethionine/tRNA-ribosyltransferase- isomerase 
Protein accessionYP_003483664 
Protein GI289596968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00731147 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTCGC TCAGAAATTA CGACTTTGAA TTGCCTGAGG AGCTAATCGC TCAAGAGCCT 
GTGGAGCCAA GAGACCACGC TAGATTAATG GTTCTTCGTA AAGGCATAGA GCATCGCTAT
TTCTATAATT TGCCAGAGTA TATGGATAAG GGAGATGTTT TAATTTTGAA CGACACAAAG
GTAATAAAGG CGAGAATTCG GGGAATAAAA GACACAGGGG GTAAGGTTGA AATTCTAATT
TTAGAGAAAT TGGGTGAGAA TTATTACAGA TGCTTGGTTA AAGGTAAGAA AATACATCCC
GGCTCTGTTC TAATATTTGA GGATATAAAA GGAGTGGTTA GAGAGAAAAA TGAGGGGATT
TGTGATATAG AGTTCAGTGG AGATATTATG GATCTCGCAC GAAGAAGAGG CGAGGTTCCT
TTACCTCCAT ACATAAAAAA TCCTCCTACT GATGCTGAGG AAAAATATCA AACAGTTTTT
GCAAGAAGAG AGGGCGCAGT CGCAGCTCCC ACAGCTGGAT TGCATTTCAC TCCGCAGTTG
CTTAAAGAAA TTGAGAAAAA AGGGGTGAAA ATAGGGTATA TAACCCTGCA TGTTAGCTAT
GGTACATTCA AGCCTGTAAA AACGGAGGAC ATAAGGGAGC ATAGGGTAGA TGAGGAGTAT
TACATTGTTG GGGAGGAAGT GGCTAAACTT ATAAACGAGA GAGAAGGAAG ATTATTTGCG
GTTGGCACAA CAGTTACCCG TGCATTGGAG AGTTCATCAA AAAATGGAAT TATATACCCC
TCGCGTGGCT ATACAATCAT TTTCATATAT CCTGGCTACA AATTTCAATC GGGCATAGAT
GCTCTAATCA CAAATTTTCA TGTGCCAAGG TCCTCTTTGA TTCTCCTCGT AACAGCTTTT
GGTGGATATG AGAGGATTAT GAAAGCATAT CGCATTGCAA TAGAGAAAAA ATATAGATTT
TACAGTTTTG GAGATGCAAT GCTAATTTTC AAAATGTAG
 
Protein sequence
MYSLRNYDFE LPEELIAQEP VEPRDHARLM VLRKGIEHRY FYNLPEYMDK GDVLILNDTK 
VIKARIRGIK DTGGKVEILI LEKLGENYYR CLVKGKKIHP GSVLIFEDIK GVVREKNEGI
CDIEFSGDIM DLARRRGEVP LPPYIKNPPT DAEEKYQTVF ARREGAVAAP TAGLHFTPQL
LKEIEKKGVK IGYITLHVSY GTFKPVKTED IREHRVDEEY YIVGEEVAKL INEREGRLFA
VGTTVTRALE SSSKNGIIYP SRGYTIIFIY PGYKFQSGID ALITNFHVPR SSLILLVTAF
GGYERIMKAY RIAIEKKYRF YSFGDAMLIF KM