Gene Aboo_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1290 
Symbol 
ID8828252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1236946 
End bp1237575 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content32% 
IMG OID 
Productisochorismatase hydrolase 
Protein accessionYP_003483660 
Protein GI289596964 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.534089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGCT CTAGGTACCT AACTTCAGCT TTTGTATCTT TAATGGAAAA GAGGTATTTT 
AGATTCGAAA AACTCAGAAA AATTCAGGGG AAAGTTGCCA TACTGGGTAT TGATATGCAA
GGTTATTTTT TAAATCCCCT AGGAAAAGCT TATCTTCCAT CATCACCTGA GTTTTTGAAT
AGAATAAAAA GGCTTTATGA GTTTGCAAAA AATAAAGGTA TTGAGATTAT TCTAACAAAA
CATTGCCATG AAGGTAATAT ACTATCAAAA TGGTGGAACG ATGAAATGAA ATGTGATGAT
ACCTCCACTG CAATTTTAGA AGAAATAAGA AAATATGGTA ATAAAATTAT TGAGAAAAAT
ACATATAATG CTTTTCTTAA AACTGAGCTT GAAGAGCATC TCAAGAATAA AGGTGTTGAA
ACTTTAATTA TCACAGGAGT GATGACACAT CTTTGCTGTG AAACCACTGC GCGAGATGCT
TTTAATAGAG GGTTTAATGT AATTTTTCCG ATTGATGGAA CTATAACTCA AAATGAAGAA
TTGCATGAAT GCACTTTGAG AAGCATATCC CATGGATTCG GTGTTGTTAT ATCAATAGAG
AGGTTATTAG AATGGTTAGT TCAAAAGTAG
 
Protein sequence
MYRSRYLTSA FVSLMEKRYF RFEKLRKIQG KVAILGIDMQ GYFLNPLGKA YLPSSPEFLN 
RIKRLYEFAK NKGIEIILTK HCHEGNILSK WWNDEMKCDD TSTAILEEIR KYGNKIIEKN
TYNAFLKTEL EEHLKNKGVE TLIITGVMTH LCCETTARDA FNRGFNVIFP IDGTITQNEE
LHECTLRSIS HGFGVVISIE RLLEWLVQK