Gene Aboo_1281 details

Gene Information

• Locus tag: Aboo_1281
• ID: 8828243
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 1228662
• End bp: 1229210
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 40%
• Product: KH domain protein
• Protein accession: YP_003483651
• Protein GI: 289596955

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGTATG TTAAGATTCC AAAATCAAGG GTTGGTGCTC TCATAGGAAA GCATGGAGAA 
GTCAAGAAGA AAGTGGAAGA AATATCGGGA GTGAAAATGG ATATAAACTC AAATGATGGA 
GATGTTGTTA TTGACGAATC CTCAGGGGAT CCCTTGATGG CCTTAAAAGT GAGAGATTTT 
GTTATGGCAG TAGGTCGTGG GTTCTCCCCA GAGCGGGCTT GGAGGATATT CAATGAAGAT 
GTCTACTTTG AAGTTATAGA CATAAAAGAA TTCACAGGAA AGAGAGAAAA TAGAATAAGG 
GTATTGAGAG GAAGAATTAT AGGAAAGAAT GGAAAAACTA GGAGGATAAT AGAGGAGATG 
AGCGGCGCTT CCATATCCGT CTATGGCTAC ACTGTTGCAA TAATTGGAGA TTACACTCAA 
ATGGAAATCG CTAAGAAAGC TGTAGAGATG CTTCTCCGGG GAAGTAAACA TGCAACAATA 
TATCACTTCT TAGAGAAGAA GAGAAGGGAG AACAAGTACA GGGCTCTGGA TTATTACTAC 
ATCCAGTGA 

 

Protein sequence

MMYVKIPKSR VGALIGKHGE VKKKVEEISG VKMDINSNDG DVVIDESSGD PLMALKVRDF 
VMAVGRGFSP ERAWRIFNED VYFEVIDIKE FTGKRENRIR VLRGRIIGKN GKTRRIIEEM 
SGASISVYGY TVAIIGDYTQ MEIAKKAVEM LLRGSKHATI YHFLEKKRRE NKYRALDYYY 
IQ