Gene Aboo_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_1274 
Symbol 
ID8828236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp1221622 
End bp1223340 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content38% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003483644 
Protein GI289596948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACAA TGAAGCAGCT AGGCAGGCTC TTAACCTATT TGCGTACCCA TGCAATTCAT 
TTCTCACTTG GATTGCTAAT AGTTGTTCTT ATGGCATATA CCAGCGGGAT TATACCAATA
CTTATAAAAA ACGCAATTGA CAAGGGCATT AGCACAGGGA ATTATAGCAT AGCCATATAC
TATTCCCTCT TAATTCTTCT CTTTGGCGTG TTAAACGGAA TGTTTAGTTT TTCTGGAAGA
TATTTACTTA TTAAATCTGC CCAGTACGCA GTATACCATT TGAGAATGGA CACTTTCAGG
GCAATACAGA GACAGGAGAT GGAGTTTTTC GACAAAACTT TCTCTGGACA GTTAATAAGC
AGAATAACCA ATGACACAGA GAGAATAACC AGATTTCTTT CTTTTCGGAT TAGAATGTTT
GTTTATTCTA TTTTCCTTAT TGGAATTTCT CTATACTATA TGTTTGGAAT GAATATTTTG
CTAACTGGAA TTGCATTGGG TACCATAGCA ATTGTAGTTG CATTGAACGC AAGTTATGCA
ATAAAAGTTA GGCCAATTTA CGATAGAATA AGGCACCAAA CAGGCACAAT AGCATCGATA
GCAACCCAAT CAATTGCTGG AGTAAAGACA ATAAAATCTT TATCAGTAGA AGAAAATATA
AAAGATAAGT TTTCCAAAGA AAATAACTAT CTCTATTCCC TCAATATTGA TGCCACAAAA
ATAACAGCCC TCTATGGAAA CGCCCCATTC TTGGTACTCG GGATTGCAAT GAGTGTAATG
TTTTACTATG GAGGAATGGC AATTATGGGA AACACGCTAA CTGTTGGAGA GCTTGTTGCT
TTTCTCACAT ACATGCTAAC CCTGATGTGG CCCCTAAGGG CGCTGGGATT CACAATAGGA
GATATCCAGA GAAGTCTCGC TGCGGCCTCT AGATTATTTG AGGTTATAGA TTCAGCTCCA
GAGAGTATAG ATTCTCCTGA TGCAATTGAA CTTATGAATC CGAAAGGAAA GATAGAATTC
AAAAATGTGT GGTTAAAGTA TCATACTGGA AAAATGGCAC TTCGAGGTTT GAACTTTAAA
ATAAACGCTG AAGAGAGAAT CTTAATAACA GGGCCCCCTG GCTCTGGGAA AAGCACGATT
TTAAAGCTTA TCGCTAGATT TTATAAGCCA GAAAGAGGAA AAGTGCTGAT AGACGGTATA
GATATAAGAA AGATAAAGAG CAAGAATTTT AGGAAAATTG TTGCATATGT ACCACAAGAA
CCTTTCATAT TCAACAGAAG TATAAGGGAG AACATAGCAC TGGCAAAACC AGATGCCTCT
TTAGAAGAGA TAATCAAAGC TGCAAAGACA GCAAAAATAC ACGATTTCAT CTCATCCCTC
CCACAAGGTT ACGAAACGGT TGTGGGTGAA AAGGGAGTAA CTCTTTCAGG GGGTGAAAGA
CAGAGAATAG GCATTGCGAG GGCATTACTT TCTGAGCCAA AGATAATATT ACTGGACGAT
CCAGTTTCTA ATCTAGATGC TCACACAGAG AGCAGTTTGG TTGAAGATTT AAGAGATATT
CTAAGGGGTA AGACAGCAGT TATTGTATCA CAGAGGCTTT CCCTCGCAAA ACTGGTAGAT
AGAGTCATGG TAGTCAAAGA TGGGAGAATA ATAGAAGATG AGAATATAAA AGAGGGAAAA
ATGTACAGAG ATATGCTCTG GGCAGGTGAG GGAAAGTGA
 
Protein sequence
MRTMKQLGRL LTYLRTHAIH FSLGLLIVVL MAYTSGIIPI LIKNAIDKGI STGNYSIAIY 
YSLLILLFGV LNGMFSFSGR YLLIKSAQYA VYHLRMDTFR AIQRQEMEFF DKTFSGQLIS
RITNDTERIT RFLSFRIRMF VYSIFLIGIS LYYMFGMNIL LTGIALGTIA IVVALNASYA
IKVRPIYDRI RHQTGTIASI ATQSIAGVKT IKSLSVEENI KDKFSKENNY LYSLNIDATK
ITALYGNAPF LVLGIAMSVM FYYGGMAIMG NTLTVGELVA FLTYMLTLMW PLRALGFTIG
DIQRSLAAAS RLFEVIDSAP ESIDSPDAIE LMNPKGKIEF KNVWLKYHTG KMALRGLNFK
INAEERILIT GPPGSGKSTI LKLIARFYKP ERGKVLIDGI DIRKIKSKNF RKIVAYVPQE
PFIFNRSIRE NIALAKPDAS LEEIIKAAKT AKIHDFISSL PQGYETVVGE KGVTLSGGER
QRIGIARALL SEPKIILLDD PVSNLDAHTE SSLVEDLRDI LRGKTAVIVS QRLSLAKLVD
RVMVVKDGRI IEDENIKEGK MYRDMLWAGE GK