Gene Aboo_1267 details

Gene Information

• Locus tag: Aboo_1267
• ID: 8828229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 1215085
• End bp: 1217223
• Gene Length: 2139 bp
• Protein Length: 712 aa
• Translation table: 11
• GC content: 39%
• Product: V-type ATPase 116 kDa subunit
• Protein accession: YP_003483637
• Protein GI: 289596941

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTTTC CATCCAAGAT GGTGGAAGTA GAAGTGCTTC TTCATGATTC TGTTAAATAC 
GATGTTTTAG ATGCGATGCA AAGAAGGGGC TTTATGCATA TAAGCACCCA TAACATTGAA 
AATTTAGAAA ATGCAAATCC ATCTGATATA GCTACCACAA TAGTGGATTA TGAATTTAGA 
ATTGGTAAAC TAATGGAGAT TCTCAATATC TCTAAGATAA AGAAAAATGG AATGCTTGCA 
TCAATCAAAA CTGAGCCTCC AGAGAAGTAT CCTGCAAAGC ATAGAGAAAG AGAGGAGATA 
ATGAAAGATG CAGAGAGAAC CTTGGAGAGT TTAGAACCAA GAATTTTAGA TTTATACTCA 
AAATGGGAAG AAATAAATAC TGAGATTGAG AGAATAAAAA TTCAAAGGAG GCAGGTGGAG 
AAGTTAAAGG CATTACCTTT TGATGTTTCG TACTTGGGAG AAGGACCTTA TGCGTATATC 
GCTGCGGGAA CTGCAAAAAA TTTAGACCAT CTGAAAAAAT TAGAATCCGA AGGTAAAATA 
GCTTTGTGGA GTGTAACTGA GGGAAAGAAA AAGGAAGTCA ATTACATTAT TGTAGTGGCT 
TCGCATATGA AGGATAAGAA GGAACTCGAA TCTGCTTTGA GATTTGCAGG ATTTTCAGAA 
TTTGAGTTAA AAGAGTGGAA GGGTAAACCC GATAAGGTAT TGAAAGATAT GGAATTAAAA 
TCTAAAAAGC TGTCCAAAGA GAAGGAAAAA ATTCTGACAG AATTGAGGAT TTTGAGAAAG 
GAAGTTTATC CTCATCTTTC CGTTTTAAAG GATGATCTTT ATAATGAGAA AATAAAGGAG 
GAAATTCATT CAAAATTTGG CAAGACATTT TATACTACAG TAATCAGGGG CTACATACCA 
AAGGTGGATT TTGAAAGTGC AAGGAAAGTT ATCGAAAAAG CAGCGCGAGG CCTTGCATTG 
ATAAGATGGA AAGAGGCGAA GGGAGGAGAT GTCCCCGTAA AATATAACAA TCCAAGGATG 
TTTAGGCCTT TTCAGGCATT TGTGGATATG TACTCCACGC CAAAGTACGG GCATATAGAT 
CCGACTGTGA TAATAGCGCC TTTGTTCATC ATCTACTTTG GCCTTACTCT GGGAGATGCT 
GGTTATGGTA TGATAATGGC TGTACTGGGA TATATCCTAT GGAAGCCACT GGGCAAATAC 
AACTGGACAA ATAGAACACT AGGATCTATA TTATTTGTCT CCGGGTTATC GGCTGTAGTT 
TTTGGTTTAA TTCAAGGAGG TATATTTGGA CCTTTAAATG AATCGAATCC ACTTACACCT 
TTAATTCACT ACACTCCTAT CTTGGATCCA ATGCAGGACC CTATAACTCT GCTAAAGATC 
TCTCTTATGA TCGGTGTATT TCAGCTGAGC TTGGGTATGG CTCTTGGCGC GTTCCATCAC 
CTTAGAGATA AAAATTACTC TGAATTTTTG CAGGGCGAAG TGTCTTGGCT CATACTATAC 
CCTGCAGGCG GTGCGCTCAT AGGCTATTAT TTCGGATGGT GGCAGATGTC TGGAACGGCA 
GTTACAATAG CATGGATATT CACAGTAATT GGATTATTCT TATTCCTCCC AGGAGTAATG 
GGTAAACTTG TGGATAAAAA AGCCTCTATA AACGGACTAT TTTTCTTTGA TATAACAGGT 
ATGATTGGGG ATTGGCTCTC TTATTCCCGT TTACTTGCGC TAGATTTAGC TACATCCGGT 
TTGGCTCTTA CGATAAACAT CCTTGCCGGG ATAATAAGGA CTATGACTGC AGGAGCCACA 
GGCATGGTTT GCTGTCTTCC AGTGCTCCTT GCAGGTGTTG CTCTTGCTCT TCTTTGGATG 
AGAAAGAAGG ATCCCATAAA GAAGGGCATA ATACTGCTCC TCCTCGTATT TGGTATAGTG 
GGAGTGGTAA GCATAACAGC AGCCATATGG TTATTCATAC TTCTCTTCTT GATTATAGGG 
CATATAGGGA ACTCAATGCT TCAAGCATTG GGCTCATTTG TGCACTCTCT GCGTTTGCAG 
TATGTAGAGT TCTTCTCAAA GTTCTATGAG GGAGATGGTG TAAAGTTTGT GCCGTTTAGA 
GAAGTTAGGA AACATAGCAG GTTGGAGGTG AATGAATAA 

 

Protein sequence

MLFPSKMVEV EVLLHDSVKY DVLDAMQRRG FMHISTHNIE NLENANPSDI ATTIVDYEFR 
IGKLMEILNI SKIKKNGMLA SIKTEPPEKY PAKHREREEI MKDAERTLES LEPRILDLYS 
KWEEINTEIE RIKIQRRQVE KLKALPFDVS YLGEGPYAYI AAGTAKNLDH LKKLESEGKI 
ALWSVTEGKK KEVNYIIVVA SHMKDKKELE SALRFAGFSE FELKEWKGKP DKVLKDMELK 
SKKLSKEKEK ILTELRILRK EVYPHLSVLK DDLYNEKIKE EIHSKFGKTF YTTVIRGYIP 
KVDFESARKV IEKAARGLAL IRWKEAKGGD VPVKYNNPRM FRPFQAFVDM YSTPKYGHID 
PTVIIAPLFI IYFGLTLGDA GYGMIMAVLG YILWKPLGKY NWTNRTLGSI LFVSGLSAVV 
FGLIQGGIFG PLNESNPLTP LIHYTPILDP MQDPITLLKI SLMIGVFQLS LGMALGAFHH 
LRDKNYSEFL QGEVSWLILY PAGGALIGYY FGWWQMSGTA VTIAWIFTVI GLFLFLPGVM 
GKLVDKKASI NGLFFFDITG MIGDWLSYSR LLALDLATSG LALTINILAG IIRTMTAGAT 
GMVCCLPVLL AGVALALLWM RKKDPIKKGI ILLLLVFGIV GVVSITAAIW LFILLFLIIG 
HIGNSMLQAL GSFVHSLRLQ YVEFFSKFYE GDGVKFVPFR EVRKHSRLEV NE